2022-03-22 21:22:41,373 (natcap.invest.utils) utils.prepare_workspace(162) Level 100 Writing log messages to C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\InVEST-Habitat-Quality-log-2022-03-22--21_22_41.txt
2022-03-22 21:22:41,377 (natcap.invest.ui.model) model._logged_target(1643) Level 100 Starting model with parameters: 
Arguments for InVEST natcap.invest.habitat_quality 3.10.2:
half_saturation_constant 0.05
lulc_cur_path            C:/Users/nicom/Documents/TESIS/Habitat Quality/LULC/cober.tif
n_workers                -1
results_suffix           
sensitivity_table_path   C:/Users/nicom/Downloads/Sensitivity Table - Hoja 1.csv
threats_table_path       C:/Users/nicom/Documents/TESIS/Habitat Quality/AMENAZAS/Threats Table - Hoja 1 (2).csv
workspace_dir            C:/Users/nicom/Documents/TESIS/Habitat Quality/invest

2022-03-22 21:22:41,377 (natcap.invest.habitat_quality) habitat_quality.execute(259) INFO Starting execute of Habitat Quality model.
2022-03-22 21:22:41,378 (natcap.invest.habitat_quality) habitat_quality.execute(265) INFO Creating workspace
2022-03-22 21:22:41,398 (natcap.invest.habitat_quality) habitat_quality.execute(278) INFO Checking Threat and Sensitivity tables for compliance
2022-03-22 21:22:41,433 (natcap.invest.habitat_quality) habitat_quality.execute(305) INFO Validate threat rasters and collect unique LULC codes
2022-03-22 21:22:41,452 (natcap.invest.habitat_quality) habitat_quality.execute(323) DEBUG Validating path for threat: amelh
2022-03-22 21:23:10,823 (natcap.invest.habitat_quality) habitat_quality.execute(323) DEBUG Validating path for threat: amele
2022-03-22 21:23:40,072 (natcap.invest.habitat_quality) habitat_quality.execute(323) DEBUG Validating path for threat: amevia
2022-03-22 21:24:09,642 (natcap.invest.habitat_quality) habitat_quality.execute(323) DEBUG Validating path for threat: ameiba
2022-03-22 21:24:09,653 (natcap.invest.habitat_quality) habitat_quality.execute(323) DEBUG Validating path for threat: ameurb
2022-03-22 21:24:40,035 (natcap.invest.habitat_quality) habitat_quality.execute(323) DEBUG Validating path for threat: ameind
2022-03-22 21:25:10,039 (natcap.invest.habitat_quality) habitat_quality.execute(367) INFO Checking threat raster values are valid ( 0 <= x <= 1 ).
2022-03-22 21:25:10,045 (natcap.invest.habitat_quality) habitat_quality.execute(378) INFO Aligning and resizing land cover and threat rasters
2022-03-22 21:25:10,049 (natcap.invest.habitat_quality) habitat_quality.execute(401) DEBUG Raster paths for aligning: ['C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\\intermediate\\cober_aligned.tif', 'C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\\intermediate\\amelh_aligned.tif', 'C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\\intermediate\\amele_aligned.tif', 'C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\\intermediate\\amevia_aligned.tif', 'C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\\intermediate\\ameiba_aligned.tif', 'C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\\intermediate\\ameurb_aligned.tif', 'C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\\intermediate\\ameind_aligned.tif']
2022-03-22 21:25:10,081 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(697) DEBUG assuming manual bounding box mode of [432957.5652999999, 463658.5039000008, 512142.5652999999, 519397.5039000008]
2022-03-22 21:25:16,139 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 6.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\cober_aligned.tif
2022-03-22 21:25:21,148 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 11.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\cober_aligned.tif
2022-03-22 21:25:26,512 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 16.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\cober_aligned.tif
2022-03-22 21:25:31,915 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 21.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\cober_aligned.tif
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2022-03-22 21:27:09,683 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 1 of 7 aligned: cober_aligned.tif
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2022-03-22 21:28:58,950 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 2 of 7 aligned: amelh_aligned.tif
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2022-03-22 21:33:36,940 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 67.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameiba_aligned.tif
2022-03-22 21:33:42,005 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 74.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameiba_aligned.tif
2022-03-22 21:33:47,429 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 82.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameiba_aligned.tif
2022-03-22 21:33:52,875 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 90.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameiba_aligned.tif
2022-03-22 21:33:58,157 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 99.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameiba_aligned.tif
2022-03-22 21:33:58,795 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 100.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameiba_aligned.tif
2022-03-22 21:34:00,020 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 5 of 7 aligned: ameiba_aligned.tif
2022-03-22 21:34:05,752 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 7.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameurb_aligned.tif
2022-03-22 21:34:11,304 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 13.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameurb_aligned.tif
2022-03-22 21:34:16,849 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 19.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameurb_aligned.tif
2022-03-22 21:34:22,690 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 25.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameurb_aligned.tif
2022-03-22 21:34:28,192 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 31.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameurb_aligned.tif
2022-03-22 21:34:33,829 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 37.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameurb_aligned.tif
2022-03-22 21:34:39,679 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 43.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameurb_aligned.tif
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2022-03-22 21:35:01,951 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 66.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameurb_aligned.tif
2022-03-22 21:35:07,585 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 71.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameurb_aligned.tif
2022-03-22 21:35:13,607 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 77.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameurb_aligned.tif
2022-03-22 21:35:19,685 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 83.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameurb_aligned.tif
2022-03-22 21:35:25,419 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 89.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameurb_aligned.tif
2022-03-22 21:35:31,196 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 95.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameurb_aligned.tif
2022-03-22 21:35:35,433 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 100.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameurb_aligned.tif
2022-03-22 21:35:36,111 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 6 of 7 aligned: ameurb_aligned.tif
2022-03-22 21:35:41,149 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 6.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameind_aligned.tif
2022-03-22 21:35:46,434 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 12.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameind_aligned.tif
2022-03-22 21:35:52,159 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 18.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameind_aligned.tif
2022-03-22 21:35:57,660 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 24.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameind_aligned.tif
2022-03-22 21:36:02,676 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 29.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameind_aligned.tif
2022-03-22 21:36:08,392 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 35.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameind_aligned.tif
2022-03-22 21:36:14,063 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 41.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameind_aligned.tif
2022-03-22 21:36:20,047 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 47.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameind_aligned.tif
2022-03-22 21:36:25,504 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 52.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameind_aligned.tif
2022-03-22 21:36:31,315 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 58.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameind_aligned.tif
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2022-03-22 21:36:53,573 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 78.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameind_aligned.tif
2022-03-22 21:36:59,538 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 84.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameind_aligned.tif
2022-03-22 21:37:05,136 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 90.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameind_aligned.tif
2022-03-22 21:37:10,651 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 96.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameind_aligned.tif
2022-03-22 21:37:14,144 (pygeoprocessing.geoprocessing) geoprocessing.logger_callback(3320) INFO Warp 100.0% complete C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\ameind_aligned.tif
2022-03-22 21:37:14,826 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 7 of 7 aligned: ameind_aligned.tif
2022-03-22 21:37:14,827 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(828) INFO aligned all 7 rasters.
2022-03-22 21:37:14,837 (natcap.invest.habitat_quality) habitat_quality.execute(413) DEBUG Updating dict raster paths to reflect aligned paths
2022-03-22 21:37:14,837 (natcap.invest.habitat_quality) habitat_quality.execute(431) INFO Starting habitat_quality biophysical calculations
2022-03-22 21:37:19,853 (pygeoprocessing.geoprocessing) geoprocessing.<lambda>(957) INFO filling new raster C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\access_layer.tif with 1.0 -- 11.20% complete
2022-03-22 21:37:24,854 (pygeoprocessing.geoprocessing) geoprocessing.<lambda>(957) INFO filling new raster C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\access_layer.tif with 1.0 -- 20.14% complete
2022-03-22 21:37:29,854 (pygeoprocessing.geoprocessing) geoprocessing.<lambda>(957) INFO filling new raster C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\access_layer.tif with 1.0 -- 29.81% complete
2022-03-22 21:37:34,854 (pygeoprocessing.geoprocessing) geoprocessing.<lambda>(957) INFO filling new raster C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\access_layer.tif with 1.0 -- 39.55% complete
2022-03-22 21:37:39,855 (pygeoprocessing.geoprocessing) geoprocessing.<lambda>(957) INFO filling new raster C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\access_layer.tif with 1.0 -- 49.22% complete
2022-03-22 21:37:44,855 (pygeoprocessing.geoprocessing) geoprocessing.<lambda>(957) INFO filling new raster C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\access_layer.tif with 1.0 -- 58.84% complete
2022-03-22 21:37:49,856 (pygeoprocessing.geoprocessing) geoprocessing.<lambda>(957) INFO filling new raster C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\access_layer.tif with 1.0 -- 68.37% complete
2022-03-22 21:37:54,856 (pygeoprocessing.geoprocessing) geoprocessing.<lambda>(957) INFO filling new raster C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\access_layer.tif with 1.0 -- 77.99% complete
2022-03-22 21:37:59,857 (pygeoprocessing.geoprocessing) geoprocessing.<lambda>(957) INFO filling new raster C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\access_layer.tif with 1.0 -- 87.70% complete
2022-03-22 21:38:04,857 (pygeoprocessing.geoprocessing) geoprocessing.<lambda>(957) INFO filling new raster C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\access_layer.tif with 1.0 -- 97.35% complete
2022-03-22 21:38:07,416 (natcap.invest.habitat_quality) habitat_quality.execute(475) INFO Calculating habitat quality for landuse: C:/Users/nicom/Documents/TESIS/Habitat Quality/invest\intermediate\cober_aligned.tif
2022-03-22 21:38:07,483 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker
2022-03-22 21:38:07,485 (pygeoprocessing.geoprocessing_core) threading.run(870) DEBUG stats worker PID: 18400
2022-03-22 21:38:07,486 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker <Thread(Thread-65, started daemon 22832)>
2022-03-22 21:38:12,480 (pygeoprocessing.geoprocessing) geoprocessing.<lambda>(477) INFO 5.3% complete
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2022-03-22 21:40:37,533 (pygeoprocessing.geoprocessing) geoprocessing.<lambda>(477) INFO 97.1% complete
2022-03-22 21:40:40,474 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(482) INFO 100.0% complete
2022-03-22 21:40:40,475 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(485) INFO Waiting for raster stats worker result.
2022-03-22 21:40:41,504 (natcap.invest.habitat_quality) habitat_quality.execute(509) DEBUG Calculating threat: amelh.
Threat data: {'threat': 'amelh', 'max_dist': 15.0, 'weight': 0.5, 'decay': 'exponential', 'cur_path': 'amelh.tif'}
2022-03-22 21:40:41,519 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(881) DEBUG Max distance in pixels: 15000.0
2022-03-22 21:58:52,913 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2678) INFO starting convolve
2022-03-22 22:00:16,184 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2696) DEBUG start fill work queue thread
2022-03-22 22:00:16,185 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2700) DEBUG fill work queue
2022-03-22 22:00:16,185 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2714) DEBUG start worker thread
2022-03-22 22:00:16,187 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2726) INFO 23206701680 sent to workers, wait for worker results
2022-03-22 22:01:16,195 (taskgraph.Task) Task.add_task(706) ERROR Something went wrong when adding task convolve_exponential_c_amelh (10), terminating taskgraph.
Traceback (most recent call last):
  File "taskgraph\Task.py", line 674, in add_task
  File "taskgraph\Task.py", line 1093, in _call
  File "pygeoprocessing\geoprocessing.py", line 2730, in convolve_2d
  File "queue.py", line 178, in get
_queue.Empty
2022-03-22 22:01:16,217 (natcap.invest.utils) utils.prepare_workspace(167) ERROR Exception while executing Habitat-Quality
Traceback (most recent call last):
  File "natcap\invest\utils.py", line 165, in prepare_workspace
  File "natcap\invest\ui\model.py", line 1649, in _logged_target
  File "natcap\invest\habitat_quality.py", line 546, in execute
  File "taskgraph\Task.py", line 674, in add_task
  File "taskgraph\Task.py", line 1093, in _call
  File "pygeoprocessing\geoprocessing.py", line 2730, in convolve_2d
  File "queue.py", line 178, in get
_queue.Empty
2022-03-22 22:01:16,220 (natcap.invest.utils) utils.prepare_workspace(170) INFO Elapsed time: 38m 34.840000000000146s
2022-03-22 22:01:16,220 (natcap.invest.utils) utils.prepare_workspace(173) INFO Execution finished