2023-04-12 04:59:41,088 (natcap.invest.utils) utils.prepare_workspace(161) Level 100 Writing log messages to [C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\InVEST-Habitat-Quality-log-2023-04-12--04_59_41.txt] 2023-04-12 04:59:41,091 (natcap.invest.ui.model) model._logged_target(1626) Level 100 Starting model with parameters: Arguments for InVEST natcap.invest.habitat_quality 3.12.1: half_saturation_constant 0.0791913195 lulc_cur_path C:/Users/gabriel.perilla/Documents/iclei/bucaramanga/habitat/habitat3116.tif n_workers -1 results_suffix buc sensitivity_table_path C:/Users/gabriel.perilla/Documents/iclei/bucaramanga/habitat/habitat.csv threats_table_path C:/Users/gabriel.perilla/Documents/iclei/bucaramanga/habitat/amenazas.csv workspace_dir C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc 2023-04-12 04:59:41,092 (natcap.invest.habitat_quality) habitat_quality.execute(258) INFO Starting execute of Habitat Quality model. 2023-04-12 04:59:41,092 (natcap.invest.habitat_quality) habitat_quality.execute(264) INFO Creating workspace 2023-04-12 04:59:41,498 (natcap.invest.habitat_quality) habitat_quality.execute(277) INFO Checking Threat and Sensitivity tables for compliance 2023-04-12 04:59:41,518 (natcap.invest.habitat_quality) habitat_quality.execute(301) INFO Validate threat rasters and collect unique LULC codes 2023-04-12 04:59:41,519 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: agricola 2023-04-12 04:59:53,113 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: mineria 2023-04-12 04:59:53,233 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: botadero 2023-04-12 04:59:53,338 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: invasion 2023-04-12 04:59:53,463 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: viasprincipales 2023-04-12 04:59:53,579 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: viassecundarias 2023-04-12 04:59:53,733 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: urbano 2023-04-12 04:59:53,921 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: crecimientourbano 2023-04-12 04:59:54,042 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: basuracanoseco 2023-04-12 04:59:54,129 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: industria 2023-04-12 04:59:54,238 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: viasurbanas 2023-04-12 04:59:54,346 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: mineriaoro 2023-04-12 04:59:54,463 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: torreselectricas 2023-04-12 04:59:54,571 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: tratamientoaguas 2023-04-12 04:59:54,679 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: piscinas 2023-04-12 04:59:54,799 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: cicloruta 2023-04-12 04:59:54,913 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: zonaminera 2023-04-12 04:59:55,014 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: deslizamiento 2023-04-12 04:59:55,217 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: deforestacion 2023-04-12 04:59:55,321 (natcap.invest.habitat_quality) habitat_quality.execute(319) DEBUG Validating path for threat: cambioclimatico 2023-04-12 04:59:55,430 (natcap.invest.habitat_quality) habitat_quality.execute(356) INFO Checking threat raster values are valid ( 0 <= x <= 1 ). 2023-04-12 04:59:55,430 (natcap.invest.habitat_quality) habitat_quality.execute(367) INFO Aligning, resizing, and reprojecting raster inputs to that of the current land cover. 2023-04-12 04:59:55,436 (natcap.invest.habitat_quality) habitat_quality.execute(393) DEBUG Raster paths for aligning: ['C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\habitat3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazaagro_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazamineria_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazabotadero_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazainvasion_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazaviaprimaria_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazaviasecundaria_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazaurbano_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazacrecimientourbano_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazabasuracanoseco_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazaindustria_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazaviaurbana_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazamineriaoro_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazatorreelectrica_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazatratamientoaguas_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazapiscina_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazacicloruta_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazazonaminera_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazadeslizamiento_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazadeforestacion_buc_3116_aligned_buc.tif', 'C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\\intermediate\\amenazacambioclimatico_buc_3116_aligned_buc.tif'] 2023-04-12 04:59:55,515 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(698) DEBUG assuming manual bounding box mode of [1095801.6716, 1264599.1027, 1119206.0414, 1298423.4703] 2023-04-12 04:59:55,560 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 1 of 21 aligned: habitat3116_aligned_buc.tif 2023-04-12 04:59:55,587 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 2 of 21 aligned: amenazaagro_buc_3116_aligned_buc.tif 2023-04-12 04:59:55,623 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 3 of 21 aligned: amenazamineria_buc_3116_aligned_buc.tif 2023-04-12 04:59:55,663 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 4 of 21 aligned: amenazabotadero_buc_3116_aligned_buc.tif 2023-04-12 04:59:55,691 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 5 of 21 aligned: amenazainvasion_buc_3116_aligned_buc.tif 2023-04-12 04:59:55,725 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 6 of 21 aligned: amenazaviaprimaria_buc_3116_aligned_buc.tif 2023-04-12 04:59:55,759 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 7 of 21 aligned: amenazaviasecundaria_buc_3116_aligned_buc.tif 2023-04-12 04:59:55,803 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 8 of 21 aligned: amenazaurbano_buc_3116_aligned_buc.tif 2023-04-12 04:59:55,829 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 9 of 21 aligned: amenazacrecimientourbano_buc_3116_aligned_buc.tif 2023-04-12 04:59:55,855 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 10 of 21 aligned: amenazabasuracanoseco_buc_3116_aligned_buc.tif 2023-04-12 04:59:55,911 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 11 of 21 aligned: amenazaindustria_buc_3116_aligned_buc.tif 2023-04-12 04:59:55,938 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 12 of 21 aligned: amenazaviaurbana_buc_3116_aligned_buc.tif 2023-04-12 04:59:55,963 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 13 of 21 aligned: amenazamineriaoro_buc_3116_aligned_buc.tif 2023-04-12 04:59:56,006 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 14 of 21 aligned: amenazatorreelectrica_buc_3116_aligned_buc.tif 2023-04-12 04:59:56,030 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 15 of 21 aligned: amenazatratamientoaguas_buc_3116_aligned_buc.tif 2023-04-12 04:59:56,065 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 16 of 21 aligned: amenazapiscina_buc_3116_aligned_buc.tif 2023-04-12 04:59:56,119 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 17 of 21 aligned: amenazacicloruta_buc_3116_aligned_buc.tif 2023-04-12 04:59:56,146 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 18 of 21 aligned: amenazazonaminera_buc_3116_aligned_buc.tif 2023-04-12 04:59:56,189 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 19 of 21 aligned: amenazadeslizamiento_buc_3116_aligned_buc.tif 2023-04-12 04:59:56,233 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 20 of 21 aligned: amenazadeforestacion_buc_3116_aligned_buc.tif 2023-04-12 04:59:56,280 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(825) INFO 21 of 21 aligned: amenazacambioclimatico_buc_3116_aligned_buc.tif 2023-04-12 04:59:56,280 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(829) INFO aligned all 21 rasters. 2023-04-12 04:59:56,396 (natcap.invest.habitat_quality) habitat_quality.execute(408) DEBUG Updating dict raster paths to reflect aligned paths 2023-04-12 04:59:56,397 (natcap.invest.habitat_quality) habitat_quality.execute(426) INFO Starting habitat_quality biophysical calculations 2023-04-12 04:59:56,696 (natcap.invest.habitat_quality) habitat_quality.execute(484) INFO Calculating habitat quality for landuse: C:/Users/gabriel.perilla/Documents/iclei/invest/habitatQUALITY/buc\intermediate\habitat3116_aligned_buc.tif 2023-04-12 04:59:56,713 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 04:59:56,715 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 04:59:56,715 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 04:59:56,754 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 04:59:56,755 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 04:59:56,862 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: agricola. Threat data: {'threat': 'agricola', 'max_dist': 2.0, 'weight': 0.5, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazaagro_buc_3116.tif'} 2023-04-12 04:59:56,868 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 66.82512767338008 2023-04-12 04:59:57,018 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 04:59:57,020 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 04:59:57,022 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 04:59:57,022 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 04:59:57,024 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 04:59:57,155 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 04:59:57,239 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_agricola_c_buc.tif 2023-04-12 04:59:57,431 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 04:59:57,433 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 04:59:57,433 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 04:59:57,472 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 04:59:57,472 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 04:59:57,621 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: mineria. Threat data: {'threat': 'mineria', 'max_dist': 1.5, 'weight': 1.0, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazamineria_buc_3116.tif'} 2023-04-12 04:59:57,627 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 50.11884575503506 2023-04-12 04:59:57,853 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 04:59:57,855 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 04:59:57,857 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 04:59:57,857 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 04:59:57,858 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 04:59:57,979 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 04:59:58,042 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_mineria_c_buc.tif 2023-04-12 04:59:58,356 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 04:59:58,358 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 04:59:58,358 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 04:59:58,397 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 04:59:58,397 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 04:59:58,554 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: botadero. Threat data: {'threat': 'botadero', 'max_dist': 2.0, 'weight': 0.8, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazabotadero_buc_3116.tif'} 2023-04-12 04:59:58,560 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 66.82512767338008 2023-04-12 04:59:58,786 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 04:59:58,787 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 04:59:58,789 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 04:59:58,790 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 04:59:58,791 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 04:59:58,926 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 04:59:59,008 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_botadero_c_buc.tif 2023-04-12 04:59:59,246 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 04:59:59,248 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 04:59:59,248 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 04:59:59,288 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 04:59:59,288 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 04:59:59,555 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: invasion. Threat data: {'threat': 'invasion', 'max_dist': 1.0, 'weight': 0.9, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazainvasion_buc_3116.tif'} 2023-04-12 04:59:59,560 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 33.41256383669004 2023-04-12 04:59:59,804 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 04:59:59,805 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 04:59:59,807 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 04:59:59,808 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 04:59:59,809 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 04:59:59,900 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 04:59:59,949 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_invasion_c_buc.tif 2023-04-12 05:00:00,171 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:00,173 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:00,173 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:00,212 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:00,213 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:00,332 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: viasprincipales. Threat data: {'threat': 'viasprincipales', 'max_dist': 0.3, 'weight': 0.6, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazaviaprimaria_buc_3116.tif'} 2023-04-12 05:00:00,338 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 10.023769151007013 2023-04-12 05:00:00,477 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:00,479 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:00,481 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:00,481 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:00,483 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:00,559 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:00,592 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_viasprincipales_c_buc.tif 2023-04-12 05:00:00,842 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:00,844 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:00,844 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:00,883 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:00,883 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:01,004 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: viassecundarias. Threat data: {'threat': 'viassecundarias', 'max_dist': 0.2, 'weight': 0.5, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazaviasecundaria_buc_3116.tif'} 2023-04-12 05:00:01,010 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 6.682512767338008 2023-04-12 05:00:01,240 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:01,242 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:01,244 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:01,244 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:01,246 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:01,314 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:01,342 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_viassecundarias_c_buc.tif 2023-04-12 05:00:01,525 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:01,527 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:01,527 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:01,566 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:01,567 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:01,757 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: urbano. Threat data: {'threat': 'urbano', 'max_dist': 0.5, 'weight': 0.7, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazaurbano_buc_3116.tif'} 2023-04-12 05:00:01,763 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 16.70628191834502 2023-04-12 05:00:01,997 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:01,999 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:02,001 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:02,002 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:02,003 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:02,081 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:02,119 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_urbano_c_buc.tif 2023-04-12 05:00:02,319 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:02,321 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:02,321 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:02,359 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:02,359 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:02,479 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: crecimientourbano. Threat data: {'threat': 'crecimientourbano', 'max_dist': 0.4, 'weight': 0.75, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazacrecimientourbano_buc_3116.tif'} 2023-04-12 05:00:02,484 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 13.365025534676017 2023-04-12 05:00:02,685 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:02,687 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:02,689 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:02,689 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:02,690 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:02,764 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:02,798 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_crecimientourbano_c_buc.tif 2023-04-12 05:00:02,953 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:02,955 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:02,955 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:02,993 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:02,993 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:03,251 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: basuracanoseco. Threat data: {'threat': 'basuracanoseco', 'max_dist': 0.1, 'weight': 0.5, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazabasuracanoseco_buc_3116.tif'} 2023-04-12 05:00:03,257 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 3.341256383669004 2023-04-12 05:00:03,797 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:03,799 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:03,802 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:03,803 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:03,804 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:03,872 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:03,902 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_basuracanoseco_c_buc.tif 2023-04-12 05:00:04,432 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:04,434 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:04,434 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:04,472 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:04,472 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:04,595 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: industria. Threat data: {'threat': 'industria', 'max_dist': 0.6, 'weight': 0.6, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazaindustria_buc_3116.tif'} 2023-04-12 05:00:04,601 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 20.047538302014026 2023-04-12 05:00:04,852 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:04,854 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:04,856 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:04,856 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:04,858 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:04,936 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:04,972 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_industria_c_buc.tif 2023-04-12 05:00:05,137 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:05,139 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:05,139 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:05,176 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:05,177 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:05,295 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: viasurbanas. Threat data: {'threat': 'viasurbanas', 'max_dist': 0.1, 'weight': 0.5, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazaviaurbana_buc_3116.tif'} 2023-04-12 05:00:05,301 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 3.341256383669004 2023-04-12 05:00:05,486 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:05,487 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:05,490 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:05,490 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:05,491 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:05,559 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:05,587 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_viasurbanas_c_buc.tif 2023-04-12 05:00:05,750 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:05,752 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:05,752 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:05,789 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:05,790 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:06,021 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: mineriaoro. Threat data: {'threat': 'mineriaoro', 'max_dist': 0.5, 'weight': 0.5, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazamineriaoro_buc_3116.tif'} 2023-04-12 05:00:06,027 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 16.70628191834502 2023-04-12 05:00:06,356 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:06,358 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:06,360 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:06,360 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:06,361 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:06,434 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:06,470 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_mineriaoro_c_buc.tif 2023-04-12 05:00:06,830 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:06,832 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:06,832 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:06,871 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:06,871 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:07,087 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: torreselectricas. Threat data: {'threat': 'torreselectricas', 'max_dist': 0.1, 'weight': 0.3, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazatorreelectrica_buc_3116.tif'} 2023-04-12 05:00:07,093 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 3.341256383669004 2023-04-12 05:00:07,353 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:07,354 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:07,357 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:07,357 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:07,358 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:07,425 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:07,454 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_torreselectricas_c_buc.tif 2023-04-12 05:00:07,656 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:07,658 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:07,658 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:07,697 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:07,697 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:07,837 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: tratamientoaguas. Threat data: {'threat': 'tratamientoaguas', 'max_dist': 0.2, 'weight': 0.4, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazatratamientoaguas_buc_3116.tif'} 2023-04-12 05:00:07,843 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 6.682512767338008 2023-04-12 05:00:08,021 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:08,022 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:08,025 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:08,025 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:08,027 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:08,094 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:08,123 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_tratamientoaguas_c_buc.tif 2023-04-12 05:00:08,285 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:08,287 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:08,287 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:08,326 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:08,326 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:08,453 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: piscinas. Threat data: {'threat': 'piscinas', 'max_dist': 0.1, 'weight': 0.2, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazapiscina_buc_3116.tif'} 2023-04-12 05:00:08,459 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 3.341256383669004 2023-04-12 05:00:08,624 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:08,626 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:08,628 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:08,628 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:08,630 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:08,697 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:08,727 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_piscinas_c_buc.tif 2023-04-12 05:00:08,988 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:08,990 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:08,990 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:09,030 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:09,031 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:09,153 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: cicloruta. Threat data: {'threat': 'cicloruta', 'max_dist': 0.05, 'weight': 0.1, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazacicloruta_buc_3116.tif'} 2023-04-12 05:00:09,159 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 1.670628191834502 2023-04-12 05:00:09,377 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:09,378 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:09,381 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:09,381 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:09,383 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:09,448 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:09,479 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_cicloruta_c_buc.tif 2023-04-12 05:00:09,620 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:09,622 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:09,622 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:09,659 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:09,660 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:09,795 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: zonaminera. Threat data: {'threat': 'zonaminera', 'max_dist': 0.5, 'weight': 1.0, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazazonaminera_buc_3116.tif'} 2023-04-12 05:00:09,801 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 16.70628191834502 2023-04-12 05:00:09,937 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:09,938 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:09,941 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:09,941 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:09,942 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:10,018 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:10,054 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_zonaminera_c_buc.tif 2023-04-12 05:00:10,356 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:10,358 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:10,358 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:10,396 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:10,397 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:10,586 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: deslizamiento. Threat data: {'threat': 'deslizamiento', 'max_dist': 0.7, 'weight': 0.9, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazadeslizamiento_buc_3116.tif'} 2023-04-12 05:00:10,592 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 23.388794685683028 2023-04-12 05:00:10,773 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:10,775 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:10,777 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:10,777 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:10,778 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:10,865 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:10,910 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_deslizamiento_c_buc.tif 2023-04-12 05:00:11,148 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:11,150 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:11,151 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:11,188 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:11,189 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:11,350 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: deforestacion. Threat data: {'threat': 'deforestacion', 'max_dist': 0.6, 'weight': 0.6, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazadeforestacion_buc_3116.tif'} 2023-04-12 05:00:11,356 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 20.047538302014026 2023-04-12 05:00:11,676 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:11,677 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:11,680 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:11,680 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:11,681 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:11,755 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:11,792 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_deforestacion_c_buc.tif 2023-04-12 05:00:12,020 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:12,022 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:12,022 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:12,059 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:12,060 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:12,186 (natcap.invest.habitat_quality) habitat_quality.execute(518) DEBUG Calculating threat: cambioclimatico. Threat data: {'threat': 'cambioclimatico', 'max_dist': 0.6, 'weight': 0.7, 'decay': 'linear', 'cur_path': 'c:\\users\\gabriel.perilla\\documents\\iclei\\bucaramanga\\habitat\\amenazacambioclimatico_buc_3116.tif'} 2023-04-12 05:00:12,192 (natcap.invest.habitat_quality) habitat_quality._create_decay_kernel(890) DEBUG Max distance in pixels: 20.047538302014026 2023-04-12 05:00:12,402 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2745) INFO starting convolve 2023-04-12 05:00:12,404 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2763) DEBUG start fill work queue thread 2023-04-12 05:00:12,406 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2767) DEBUG fill work queue 2023-04-12 05:00:12,406 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2781) DEBUG start worker thread 2023-04-12 05:00:12,408 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2793) INFO 20 sent to workers, wait for worker results 2023-04-12 05:00:12,486 (pygeoprocessing.geoprocessing) geoprocessing._fill_work_queue(2772) DEBUG work queue full 2023-04-12 05:00:12,525 (pygeoprocessing.geoprocessing) geoprocessing.convolve_2d(2859) INFO convolution worker 100.0% complete on filtered_cambioclimatico_c_buc.tif 2023-04-12 05:00:12,736 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:12,738 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:12,738 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:12,776 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:12,777 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:13,156 (natcap.invest.habitat_quality) habitat_quality.execute(618) INFO Starting raster calculation on total degradation 2023-04-12 05:00:13,389 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:13,391 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:13,391 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:14,446 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:14,446 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:14,653 (natcap.invest.habitat_quality) habitat_quality.execute(636) INFO Starting raster calculation on quality 2023-04-12 05:00:14,684 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2023-04-12 05:00:14,686 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 7472 2023-04-12 05:00:14,686 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2023-04-12 05:00:14,753 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(483) INFO 100.0% complete 2023-04-12 05:00:14,754 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(486) INFO Waiting for raster stats worker result. 2023-04-12 05:00:14,953 (natcap.invest.habitat_quality) habitat_quality.execute(649) INFO Baseline not provided to compute Rarity 2023-04-12 05:00:14,954 (natcap.invest.habitat_quality) habitat_quality.execute(676) INFO Habitat Quality Model complete. 2023-04-12 05:00:14,959 (natcap.invest.utils) utils.prepare_workspace(169) INFO Elapsed time: 33.87s 2023-04-12 05:00:14,960 (natcap.invest.utils) utils.prepare_workspace(172) INFO Execution finished