2020-10-20 18:43:07,262 utils.prepare_workspace(111) INFO Writing log messages to C:\Users\meganc\Documents\coastal_vulnerability_workspace2\InVEST-Coastal-Vulnerability-log-2020-10-20--18_43_07.txt 2020-10-20 18:43:07,263 model._logged_target(1626) Level 100 Starting model with parameters: Arguments for InVEST natcap.invest.coastal_vulnerability 3.8.9: aoi_vector_path O:/f01_projects_active/Global/p08685_mangrove/raw_data/Ecosystem Services/Coastal Protection/mangrove extent for invest/GMW_2007_v2_MinimumBoundingEckertIV.shp bathymetry_raster_path O:/f01_projects_active/Global/p08685_mangrove/raw_data/Ecosystem Services/Coastal Protection/mangrove extent for invest/global_bathymetry_GEBCO_Mosaic.tif dem_averaging_radius 900 dem_path O:/f01_projects_active/Global/p08685_mangrove/raw_data/Ecosystem Services/Coastal Protection/mangrove extent for invest/SRTM_1km_GRD.tif geomorphology_fill_value 5 geomorphology_vector_path O:/f01_projects_active/Global/p08685_mangrove/raw_data/Ecosystem Services/Coastal Protection/mangrove extent for invest/mainGeomorphology.shp habitat_table_path O:/f01_projects_active/Global/p08685_mangrove/raw_data/Ecosystem Services/Coastal Protection/mangrove extent for invest/Natural_Habitats_2007.csv landmass_vector_path C:/InVEST_3.8.9_x86/sample_data/Base_Data/global_polygon.shp max_fetch_distance 15000 model_resolution 1000 n_workers -1 population_radius 500 population_raster_path O:/f01_projects_active/Global/p08685_mangrove/raw_data/Ecosystem Services/Coastal Protection/mangrove extent for invest/ppp_2007_1km_Aggregated.tif results_suffix GMW_2007 shelf_contour_vector_path O:/f01_projects_active/Global/p08685_mangrove/raw_data/Ecosystem Services/Coastal Protection/mangrove extent for invest/continental_shelf_polyline_global.shp slr_field UNKNOWN slr_vector_path workspace_dir C:\Users\meganc\Documents\coastal_vulnerability_workspace2 wwiii_vector_path O:/f01_projects_active/Global/p08685_mangrove/raw_data/Ecosystem Services/Coastal Protection/mangrove extent for invest/WaveWatchIII_global.shp 2020-10-20 18:43:07,274 coastal_vulnerability.execute(281) INFO Validating arguments 2020-10-20 18:43:07,274 validation._wrapped_validate_func(912) DEBUG Using ARG_SPEC for validation 2020-10-20 18:43:07,274 validation._wrapped_validate_func(916) INFO Starting whole-model validation with ARGS_SPEC 2020-10-20 18:43:07,274 validation.timeout(626) INFO Starting file checking thread with timeout=5 2020-10-20 18:43:07,328 validation.timeout(638) INFO File checking thread completed. 2020-10-20 18:43:07,328 validation.timeout(626) INFO Starting file checking thread with timeout=5 2020-10-20 18:43:07,369 validation.timeout(638) INFO File checking thread completed. 2020-10-20 18:43:07,370 validation.timeout(626) INFO Starting file checking thread with timeout=5 2020-10-20 18:43:07,405 validation.timeout(638) INFO File checking thread completed. 2020-10-20 18:43:07,405 validation.timeout(626) INFO Starting file checking thread with timeout=5 2020-10-20 18:43:07,434 validation.timeout(638) INFO File checking thread completed. 2020-10-20 18:43:07,435 validation.timeout(626) INFO Starting file checking thread with timeout=5 2020-10-20 18:43:07,465 validation.timeout(638) INFO File checking thread completed. 2020-10-20 18:43:07,467 validation.timeout(626) INFO Starting file checking thread with timeout=5 2020-10-20 18:43:07,473 validation.timeout(638) INFO File checking thread completed. 2020-10-20 18:43:07,473 validation.timeout(626) INFO Starting file checking thread with timeout=5 2020-10-20 18:43:07,492 validation.timeout(638) INFO File checking thread completed. 2020-10-20 18:43:07,493 validation.timeout(626) INFO Starting file checking thread with timeout=5 2020-10-20 18:43:07,500 validation.timeout(638) INFO File checking thread completed. 2020-10-20 18:43:07,500 validation.timeout(626) INFO Starting file checking thread with timeout=5 2020-10-20 18:43:07,503 validation.timeout(638) INFO File checking thread completed. 2020-10-20 18:43:07,503 validation.timeout(626) INFO Starting file checking thread with timeout=5 2020-10-20 18:43:07,509 validation.timeout(638) INFO File checking thread completed. 2020-10-20 18:43:07,610 validation._wrapped_validate_func(963) DEBUG Validation warnings: [] 2020-10-20 18:43:15,863 geos.callback(209) ERROR IllegalArgumentException: Points of LinearRing do not form a closed linestring 2020-10-20 18:43:15,867 coastal_vulnerability._ogr_to_geometry_list(2732) WARNING Could not load feature 95 of C:/InVEST_3.8.9_x86/sample_data/Base_Data/global_polygon.shp 2020-10-20 18:43:16,818 geos.callback(209) ERROR IllegalArgumentException: Points of LinearRing do not form a closed linestring 2020-10-20 18:43:16,819 coastal_vulnerability._ogr_to_geometry_list(2732) WARNING Could not load feature 491 of C:/InVEST_3.8.9_x86/sample_data/Base_Data/global_polygon.shp 2020-10-20 18:45:40,069 geoprocessing.reproject_vector(1640) INFO starting reprojection 2020-10-20 18:45:42,425 geoprocessing.reproject_vector(1683) INFO reprojection 100.0% complete on clipped_projected_landmass_GMW_2007.gpkg 2020-10-20 18:46:55,177 coastal_vulnerability.warp_and_mask_bathymetry(1707) INFO Masking positive values from bathymetry 2020-10-20 18:47:01,357 geoprocessing.logger_callback(3239) INFO Warp 2.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:47:07,137 geoprocessing.logger_callback(3239) INFO Warp 5.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:47:14,047 geoprocessing.logger_callback(3239) INFO Warp 8.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:47:20,861 geoprocessing.logger_callback(3239) INFO Warp 11.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:47:26,365 geoprocessing.logger_callback(3239) INFO Warp 13.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:47:32,529 geoprocessing.logger_callback(3239) INFO Warp 16.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:47:37,670 geoprocessing.logger_callback(3239) INFO Warp 18.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:47:43,735 geoprocessing.logger_callback(3239) INFO Warp 21.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:47:50,921 geoprocessing.logger_callback(3239) INFO Warp 24.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:47:56,946 geoprocessing.logger_callback(3239) INFO Warp 26.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:48:03,937 geoprocessing.logger_callback(3239) INFO Warp 29.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:48:09,502 geoprocessing.logger_callback(3239) INFO Warp 32.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:48:15,852 geoprocessing.logger_callback(3239) INFO Warp 35.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:48:23,478 geoprocessing.logger_callback(3239) INFO Warp 38.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:48:29,263 geoprocessing.logger_callback(3239) INFO Warp 41.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:48:36,646 geoprocessing.logger_callback(3239) INFO Warp 44.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:48:43,207 geoprocessing.logger_callback(3239) INFO Warp 47.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:48:50,803 geoprocessing.logger_callback(3239) INFO Warp 50.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:48:56,972 geoprocessing.logger_callback(3239) INFO Warp 53.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:49:02,916 geoprocessing.logger_callback(3239) INFO Warp 56.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:49:09,278 geoprocessing.logger_callback(3239) INFO Warp 59.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:49:15,126 geoprocessing.logger_callback(3239) INFO Warp 62.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:49:21,072 geoprocessing.logger_callback(3239) INFO Warp 64.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:49:28,241 geoprocessing.logger_callback(3239) INFO Warp 67.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:49:34,623 geoprocessing.logger_callback(3239) INFO Warp 70.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:49:41,319 geoprocessing.logger_callback(3239) INFO Warp 73.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:49:47,629 geoprocessing.logger_callback(3239) INFO Warp 75.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:49:53,824 geoprocessing.logger_callback(3239) INFO Warp 78.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:50:00,443 geoprocessing.logger_callback(3239) INFO Warp 81.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:50:08,647 geoprocessing.logger_callback(3239) INFO Warp 84.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:50:14,778 geoprocessing.logger_callback(3239) INFO Warp 87.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:50:20,442 geoprocessing.logger_callback(3239) INFO Warp 89.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:50:27,278 geoprocessing.logger_callback(3239) INFO Warp 92.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:50:32,504 geoprocessing.logger_callback(3239) INFO Warp 94.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:50:40,183 geoprocessing.logger_callback(3239) INFO Warp 97.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:50:45,966 geoprocessing.logger_callback(3239) INFO Warp 99.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:50:47,681 geoprocessing.logger_callback(3239) INFO Warp 100.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\global_bathymetry_GEBCO_Mosaic_clipped_GMW_2007.tif 2020-10-20 18:50:48,456 coastal_vulnerability.clip_and_project_raster(2424) WARNING O:/f01_projects_active/Global/p08685_mangrove/raw_data/Ecosystem Services/Coastal Protection/mangrove extent for invest/global_bathymetry_GEBCO_Mosaic.tif is unprojected and will be warped to match the AOI and resampled to a pixel size of 1000 meters 2020-10-20 18:50:48,458 geoprocessing.warp_raster(1841) DEBUG transforming bounding box from [-158.1273765247014, -40.527914244586675, 158.13095680863194, 42.09291908874666] 2020-10-20 18:50:48,459 geoprocessing.warp_raster(1846) DEBUG transforming bounding to [-14864477.758449962, -5069001.9120000005, 14864814.316559153, 5241860.278630317] 2020-10-20 18:50:53,797 geoprocessing.logger_callback(3239) INFO Warp 4.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:50:59,988 geoprocessing.logger_callback(3239) INFO Warp 9.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:51:05,037 geoprocessing.logger_callback(3239) INFO Warp 13.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:51:10,140 geoprocessing.logger_callback(3239) INFO Warp 18.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:51:15,163 geoprocessing.logger_callback(3239) INFO Warp 23.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:51:20,728 geoprocessing.logger_callback(3239) INFO Warp 29.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:51:26,453 geoprocessing.logger_callback(3239) INFO Warp 35.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:51:31,907 geoprocessing.logger_callback(3239) INFO Warp 41.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:51:37,624 geoprocessing.logger_callback(3239) INFO Warp 47.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:51:43,180 geoprocessing.logger_callback(3239) INFO Warp 53.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:51:48,976 geoprocessing.logger_callback(3239) INFO Warp 59.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:51:54,474 geoprocessing.logger_callback(3239) INFO Warp 65.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:52:00,236 geoprocessing.logger_callback(3239) INFO Warp 71.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:52:05,919 geoprocessing.logger_callback(3239) INFO Warp 77.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:52:11,792 geoprocessing.logger_callback(3239) INFO Warp 83.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:52:18,120 geoprocessing.logger_callback(3239) INFO Warp 89.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:52:23,300 geoprocessing.logger_callback(3239) INFO Warp 93.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:52:29,634 geoprocessing.logger_callback(3239) INFO Warp 98.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:52:32,023 geoprocessing.logger_callback(3239) INFO Warp 100.0% complete C:\Users\meganc\Documents\coastal_vulnerability_workspace2\intermediate\wind_wave\clipped_projected_bathy_GMW_2007.tif 2020-10-20 18:52:32,292 geoprocessing.raster_calculator(375) INFO starting stats_worker 2020-10-20 18:52:32,294 geoprocessing.raster_calculator(381) INFO started stats_worker 2020-10-20 18:52:37,293 geoprocessing.(451) INFO 47.7% complete 2020-10-20 18:52:42,296 geoprocessing.(451) INFO 88.8% complete 2020-10-20 18:52:43,783 geoprocessing.raster_calculator(454) INFO 100.0%% complete 2020-10-20 18:52:43,784 geoprocessing.raster_calculator(457) INFO signaling stats worker to terminate 2020-10-20 18:52:43,784 geoprocessing.raster_calculator(459) INFO Waiting for raster stats worker result. 2020-10-20 18:52:43,788 threading.run(870) DEBUG payload is None, terminating 2020-10-20 18:52:45,537 coastal_vulnerability.prepare_landmass_line_index(623) INFO preparing landmass geometry 2020-10-20 19:38:18,385 coastal_vulnerability.prepare_landmass_line_index(643) INFO indexing geometry of landmass 2020-10-20 19:53:28,694 coastal_vulnerability.interpolate_shore_points(674) INFO creating shore points along edge of landmass 2020-10-20 19:59:38,694 Task.add_task(731) ERROR Something went wrong when adding task create shore points (3), terminating taskgraph. Traceback (most recent call last): File "site-packages\taskgraph\Task.py", line 697, in add_task File "site-packages\taskgraph\Task.py", line 1174, in _call File "site-packages\natcap\invest\coastal_vulnerability.py", line 704, in interpolate_shore_points File "site-packages\shapely\ops.py", line 114, in linemerge File "site-packages\shapely\geometry\proxy.py", line 30, in _geom File "site-packages\shapely\geometry\proxy.py", line 39, in gtag MemoryError 2020-10-20 19:59:38,696 model._logged_target(1632) ERROR Exception while executing Traceback (most recent call last): File "site-packages\natcap\invest\ui\model.py", line 1629, in _logged_target File "site-packages\natcap\invest\coastal_vulnerability.py", line 393, in execute File "site-packages\taskgraph\Task.py", line 697, in add_task File "site-packages\taskgraph\Task.py", line 1174, in _call File "site-packages\natcap\invest\coastal_vulnerability.py", line 704, in interpolate_shore_points File "site-packages\shapely\ops.py", line 114, in linemerge File "site-packages\shapely\geometry\proxy.py", line 30, in _geom File "site-packages\shapely\geometry\proxy.py", line 39, in gtag MemoryError 2020-10-20 19:59:38,697 model._logged_target(1635) INFO Execution finished 2020-10-20 19:59:38,698 utils.prepare_workspace(117) INFO Elapsed time: 1h 16m 31.4399999999996s