2019-07-05 15:58:05,328 utils.prepare_workspace(109) INFO Writing log messages to E:\Janet\UMD\Bili_David\InVest\Modeling_Janet\02_SDR\InVEST-Sediment-Delivery-Ratio-Model-(SDR)-log-2019-07-05--15_58_05.txt 2019-07-05 15:58:05,328 model._logged_target(1633) Level 100 Starting model with parameters: Arguments for InVEST natcap.invest.sdr 3.7.0: biophysical_table_path E:/Janet/UMD/Bili_David/InVest/InVest/inputs/biophysical_table/dosso/dosso_biophysical_table_SDR4.csv dem_path E:/Janet/UMD/Bili_David/InVest/InVest/inputs/topo/bili_srtm90m_dem_v4.tif drainage_path erodibility_path E:/Janet/UMD/Bili_David/InVest/InVest/inputs/erodibility/bili_soil_erodibility.img erosivity_path E:/Janet/UMD/Bili_David/InVest/InVest/inputs/erosivity/erosivity_ss.img ic_0_param 0.5 k_param 2 lulc_path E:/Janet/UMD/Bili_David/InVest/InVest/inputs/lulc/bili_lulc_rcl_SDR3.tif n_workers -1 results_suffix SDR sdr_max 0.8 threshold_flow_accumulation 1000 watersheds_path E:/Janet/UMD/Bili_David/InVest/InVest/inputs/watershed/watershed90m_bili_20K_ha_dslv.shp workspace_dir E:\Janet\UMD\Bili_David\InVest\Modeling_Janet\02_SDR 2019-07-05 15:58:09,135 geoprocessing.align_and_resize_raster_stack(729) INFO n_workers > 1 (2) so starting a processes pool. 2019-07-05 15:58:14,566 geoprocessing.align_and_resize_raster_stack(779) INFO 1 of 4 aligned: aligned_dem_SDR.tif 2019-07-05 15:58:18,470 geoprocessing.align_and_resize_raster_stack(779) INFO 2 of 4 aligned: aligned_lulc_SDR.tif 2019-07-05 15:58:24,038 geoprocessing.align_and_resize_raster_stack(779) INFO 3 of 4 aligned: aligned_erosivity_SDR.tif 2019-07-05 15:58:24,038 geoprocessing.align_and_resize_raster_stack(779) INFO 4 of 4 aligned: aligned_erodibility_SDR.tif 2019-07-05 15:58:24,164 geoprocessing.align_and_resize_raster_stack(788) INFO aligned all 4 rasters. 2019-07-05 15:58:30,000 Task._call(1068) INFO 9.8% complete 2019-07-05 15:58:36,223 Task._call(1068) INFO 29.3% complete 2019-07-05 15:58:42,223 Task._call(1068) INFO 39.1% complete 2019-07-05 15:58:48,194 Task._call(1068) INFO 48.9% complete 2019-07-05 15:58:54,016 Task._call(1068) INFO 68.4% complete 2019-07-05 15:59:00,016 Task._call(1068) INFO 78.2% complete 2019-07-05 15:59:01,907 Task._call(1068) INFO 100.0% complete 2019-07-05 15:59:08,322 geoprocessing.raster_calculator(366) INFO starting stats_worker 2019-07-05 15:59:08,322 geoprocessing.raster_calculator(372) INFO started stats_worker 2019-07-05 15:59:09,687 geoprocessing.raster_calculator(445) INFO 100.0%% complete 2019-07-05 15:59:09,687 geoprocessing.raster_calculator(448) INFO signaling stats worker to terminate 2019-07-05 15:59:09,687 threading.run(754) DEBUG payload is None, terminating 2019-07-05 15:59:09,687 geoprocessing.raster_calculator(450) INFO Waiting for raster stats worker result. 2019-07-05 15:59:18,134 Task._call(1068) INFO 19.6% complete 2019-07-05 15:59:24,144 Task._call(1068) INFO 29.3% complete 2019-07-05 15:59:30,030 Task._call(1068) INFO 39.1% complete 2019-07-05 15:59:36,078 Task._call(1068) INFO 48.9% complete 2019-07-05 15:59:42,052 Task._call(1068) INFO 58.7% complete 2019-07-05 15:59:48,006 Task._call(1068) INFO 68.5% complete 2019-07-05 15:59:55,234 Task._call(1068) INFO 100.0% complete 2019-07-05 16:00:09,502 Task._call(1068) INFO 58.6% complete 2019-07-05 16:00:17,632 Task._call(1068) INFO 88.0% complete 2019-07-05 16:00:19,562 Task._call(1068) INFO 100.0% complete 2019-07-05 16:00:20,318 geoprocessing.raster_calculator(366) INFO starting stats_worker 2019-07-05 16:00:20,318 geoprocessing.raster_calculator(372) INFO started stats_worker 2019-07-05 16:00:25,325 geoprocessing.(442) INFO 54.2% complete 2019-07-05 16:00:30,336 geoprocessing.(442) INFO 98.7% complete 2019-07-05 16:00:30,608 geoprocessing.raster_calculator(445) INFO 100.0%% complete 2019-07-05 16:00:30,608 geoprocessing.raster_calculator(448) INFO signaling stats worker to terminate 2019-07-05 16:00:30,608 geoprocessing.raster_calculator(450) INFO Waiting for raster stats worker result. 2019-07-05 16:00:30,608 threading.run(754) DEBUG payload is None, terminating 2019-07-05 16:00:38,398 Task._call(1068) INFO 58.6% complete 2019-07-05 16:00:42,269 Task._call(1068) INFO filter out incomplete divergent streams 2019-07-05 16:00:42,598 Task._call(1068) INFO 100.0% complete 2019-07-05 16:00:42,960 geoprocessing.raster_calculator(366) INFO starting stats_worker 2019-07-05 16:00:42,960 geoprocessing.raster_calculator(372) INFO started stats_worker 2019-07-05 16:00:43,750 geoprocessing.raster_calculator(445) INFO 100.0%% complete 2019-07-05 16:00:43,750 geoprocessing.raster_calculator(448) INFO signaling stats worker to terminate 2019-07-05 16:00:43,750 geoprocessing.raster_calculator(450) INFO Waiting for raster stats worker result. 2019-07-05 16:00:43,750 threading.run(754) DEBUG payload is None, terminating 2019-07-05 16:00:44,992 geoprocessing.raster_calculator(366) INFO starting stats_worker 2019-07-05 16:00:44,993 geoprocessing.raster_calculator(372) INFO started stats_worker 2019-07-05 16:00:45,913 geoprocessing.raster_calculator(445) INFO 100.0%% complete 2019-07-05 16:00:45,913 geoprocessing.raster_calculator(448) INFO signaling stats worker to terminate 2019-07-05 16:00:45,914 geoprocessing.raster_calculator(450) INFO Waiting for raster stats worker result. 2019-07-05 16:00:45,923 threading.run(754) DEBUG payload is None, terminating 2019-07-05 16:00:47,039 geoprocessing.raster_calculator(366) INFO starting stats_worker 2019-07-05 16:00:47,039 geoprocessing.raster_calculator(372) INFO started stats_worker 2019-07-05 16:00:47,828 geoprocessing.raster_calculator(445) INFO 100.0%% complete 2019-07-05 16:00:47,828 geoprocessing.raster_calculator(448) INFO signaling stats worker to terminate 2019-07-05 16:00:47,828 geoprocessing.raster_calculator(450) INFO Waiting for raster stats worker result. 2019-07-05 16:00:47,828 threading.run(754) DEBUG payload is None, terminating 2019-07-05 16:00:49,493 geoprocessing.raster_calculator(366) INFO starting stats_worker 2019-07-05 16:00:49,493 geoprocessing.raster_calculator(372) INFO started stats_worker 2019-07-05 16:00:49,509 threading.run(754) DEBUG payload is None, terminating 2019-07-05 16:00:49,509 geoprocessing.raster_calculator(477) INFO Waiting for raster stats worker result. 2019-07-05 16:00:49,509 threading.run(754) WARNING No valid pixels were received, sending None. 2019-07-05 16:00:49,525 Task.add_task(636) ERROR Something went wrong when adding task calculate RKLS (10), terminating taskgraph. Traceback (most recent call last): File "Z:\opt\atlassian\pipelines\agent\build\env\lib\site-packages\taskgraph\Task.py", line 602, in add_task File "Z:\opt\atlassian\pipelines\agent\build\env\lib\site-packages\taskgraph\Task.py", line 1068, in _call File "Z:\opt\atlassian\pipelines\agent\build\env\lib\site-packages\natcap\invest\sdr.py", line 695, in _calculate_rkls File "Z:\opt\atlassian\pipelines\agent\build\env\lib\site-packages\pygeoprocessing\geoprocessing.py", line 415, in raster_calculator File "Z:\opt\atlassian\pipelines\agent\build\env\lib\site-packages\natcap\invest\sdr.py", line 677, in rkls_function File "C:\Python27\lib\site-packages\numpy\core\numeric.py", line 2522, in isclose can be broadcasted to create the same shape as the other one. TypeError: ufunc 'isfinite' not supported for the input types, and the inputs could not be safely coerced to any supported types according to the casting rule ''safe'' 2019-07-05 16:00:49,555 model._logged_target(1639) ERROR Exception while executing Traceback (most recent call last): File "Z:\opt\atlassian\pipelines\agent\build\env\lib\site-packages\natcap\invest\ui\model.py", line 1636, in _logged_target File "Z:\opt\atlassian\pipelines\agent\build\env\lib\site-packages\natcap\invest\sdr.py", line 320, in execute File "Z:\opt\atlassian\pipelines\agent\build\env\lib\site-packages\taskgraph\Task.py", line 602, in add_task File "Z:\opt\atlassian\pipelines\agent\build\env\lib\site-packages\taskgraph\Task.py", line 1068, in _call File "Z:\opt\atlassian\pipelines\agent\build\env\lib\site-packages\natcap\invest\sdr.py", line 695, in _calculate_rkls File "Z:\opt\atlassian\pipelines\agent\build\env\lib\site-packages\pygeoprocessing\geoprocessing.py", line 415, in raster_calculator File "Z:\opt\atlassian\pipelines\agent\build\env\lib\site-packages\natcap\invest\sdr.py", line 677, in rkls_function File "C:\Python27\lib\site-packages\numpy\core\numeric.py", line 2522, in isclose can be broadcasted to create the same shape as the other one. TypeError: ufunc 'isfinite' not supported for the input types, and the inputs could not be safely coerced to any supported types according to the casting rule ''safe'' 2019-07-05 16:00:49,555 model._logged_target(1642) INFO Execution finished 2019-07-05 16:00:49,555 utils.prepare_workspace(115) INFO Elapsed time: 2m 44.23s