2022-04-12 11:45:52,943 (natcap.invest.utils) utils.prepare_workspace(162) Level 100 Writing log messages to C:\\Users\\NYI91156\\OneDrive - Mott MacDonald\\Cyprus\\Model Files\\Habitat Risk Assessment\\Output3\InVEST-Habitat-Risk-Assessment-log-2022-04-12--11_45_52.txt 2022-04-12 11:45:52,947 (natcap.invest.ui.model) model._logged_target(1643) Level 100 Starting model with parameters: Arguments for InVEST natcap.invest.hra 3.10.2: aoi_vector_path C:/Users/NYI91156/OneDrive - Mott MacDonald/Cyprus/Model Files/Habitat Risk Assessment/Input/subregions.shp criteria_table_path C:/Users/NYI91156/OneDrive - Mott MacDonald/Cyprus/Model Files/Habitat Risk Assessment/Input/exposure_consequence_criteria.csv decay_eq None info_table_path C:/Users/NYI91156/OneDrive - Mott MacDonald/Cyprus/Model Files/Habitat Risk Assessment/Input/habitat_stressor_info.csv max_rating 3 n_workers -1 resolution 500 results_suffix test4_500 risk_eq Multiplicative visualize_outputs False workspace_dir C:\\Users\\NYI91156\\OneDrive - Mott MacDonald\\Cyprus\\Model Files\\Habitat Risk Assessment\\Output3 2022-04-12 11:45:52,948 (natcap.invest.hra) hra.execute(259) INFO Validating arguments 2022-04-12 11:45:52,948 (natcap.invest.validation) validation._wrapped_validate_func(1026) DEBUG Using ARG_SPEC for validation 2022-04-12 11:45:52,948 (natcap.invest.validation) validation._wrapped_validate_func(1030) INFO Starting whole-model validation with ARGS_SPEC 2022-04-12 11:45:52,949 (natcap.invest.validation) validation.timeout(716) DEBUG Starting file checking thread with timeout=5 2022-04-12 11:45:52,950 (natcap.invest.validation) validation.timeout(727) DEBUG File checking thread completed. 2022-04-12 11:45:52,950 (natcap.invest.validation) validation.timeout(716) DEBUG Starting file checking thread with timeout=5 2022-04-12 11:45:52,965 (natcap.invest.validation) validation.timeout(727) DEBUG File checking thread completed. 2022-04-12 11:45:52,966 (natcap.invest.validation) validation.timeout(716) DEBUG Starting file checking thread with timeout=5 2022-04-12 11:45:52,972 (natcap.invest.validation) validation.timeout(727) DEBUG File checking thread completed. 2022-04-12 11:45:52,974 (natcap.invest.validation) validation.timeout(716) DEBUG Starting file checking thread with timeout=5 2022-04-12 11:45:52,993 (natcap.invest.validation) validation.timeout(727) DEBUG File checking thread completed. 2022-04-12 11:45:52,993 (natcap.invest.validation) validation._wrapped_validate_func(1067) DEBUG Validation warnings: [] 2022-04-12 11:45:52,993 (natcap.invest.hra) hra.execute(265) INFO Validating criteria table file and return cleaned dataframe. 2022-04-12 11:45:53,002 (natcap.invest.hra) hra._get_criteria_dataframe(2674) INFO Criteria dataframe was created successfully. 2022-04-12 11:45:53,300 (natcap.invest.hra) hra._get_attributes_from_df(2744) DEBUG resilience_attributes: ['recruitment rate', 'natural mortality rate', 'connectivity rate', 'age at maturity'] 2022-04-12 11:45:53,300 (natcap.invest.hra) hra._get_attributes_from_df(2770) DEBUG stressor_attributes: {'Runway': ['frequency of disturbance', 'change in area rating', 'change in structure rating', 'temporal overlap rating', 'management effectiveness', 'intensity rating'], 'Buildings': ['frequency of disturbance', 'change in area rating', 'change in structure rating', 'temporal overlap rating', 'management effectiveness', 'intensity rating'], 'Road': ['frequency of disturbance', 'change in area rating', 'change in structure rating', 'temporal overlap rating', 'management effectiveness', 'intensity rating']} 2022-04-12 11:45:53,312 (natcap.invest.hra) hra._validate_rating(2814) WARNING "recruitment rate" for habitat Water bodies has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,312 (natcap.invest.hra) hra._validate_rating(2814) WARNING "natural mortality rate" for habitat Water bodies has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,313 (natcap.invest.hra) hra._validate_rating(2814) WARNING "connectivity rate" for habitat Water bodies has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,318 (natcap.invest.hra) hra._validate_rating(2814) WARNING "recruitment rate" for habitat Mediterranean temporary ponds has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,318 (natcap.invest.hra) hra._validate_rating(2814) WARNING "natural mortality rate" for habitat Mediterranean temporary ponds has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,319 (natcap.invest.hra) hra._validate_rating(2814) WARNING "connectivity rate" for habitat Mediterranean temporary ponds has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,324 (natcap.invest.hra) hra._get_recovery_dataframe(3119) INFO Recovery dataframe was created successfully. 2022-04-12 11:45:53,329 (natcap.invest.hra) hra._get_overlap_dataframe(2916) DEBUG multi_index: MultiIndex([( 'Urban', ...), ( 'Urban', ...), ( 'Urban', ...), ( 'Broad-leaved forest', ...), ( 'Broad-leaved forest', ...), ( 'Broad-leaved forest', ...), ( 'Coniferous forest', ...), ( 'Coniferous forest', ...), ( 'Coniferous forest', ...), ( 'Natural grasslands', ...), ( 'Natural grasslands', ...), ( 'Natural grasslands', ...), ( 'Beaches dunes sands', ...), ( 'Beaches dunes sands', ...), ( 'Beaches dunes sands', ...), ( 'Sparsely vegetated areas', ...), ( 'Sparsely vegetated areas', ...), ( 'Sparsely vegetated areas', ...), ( 'Inland marshes', ...), ( 'Inland marshes', ...), ( 'Inland marshes', ...), ( 'Salt marshes', ...), ( 'Salt marshes', ...), ( 'Salt marshes', ...), ( 'Water bodies', ...), ( 'Water bodies', ...), ( 'Water bodies', ...), ( 'Posidonia beds (Posidonion oceanicae)', ...), ( 'Posidonia beds (Posidonion oceanicae)', ...), ( 'Posidonia beds (Posidonion oceanicae)', ...), ( 'Arborescent matorral with Zyziphus', ...), ( 'Arborescent matorral with Zyziphus', ...), ( 'Arborescent matorral with Zyziphus', ...), ( 'Thermo-Mediterranean and pre-desert scrub', ...), ( 'Thermo-Mediterranean and pre-desert scrub', ...), ( 'Thermo-Mediterranean and pre-desert scrub', ...), ( 'Mediterranean temporary ponds', ...), ( 'Mediterranean temporary ponds', ...), ( 'Mediterranean temporary ponds', ...), ( 'Pseudo-steppe with grasses and annuals of the Thero-Brachypodietea', ...), ( 'Pseudo-steppe with grasses and annuals of the Thero-Brachypodietea', ...), ( 'Pseudo-steppe with grasses and annuals of the Thero-Brachypodietea', ...), ('Pseudo-steppe with grasses and annuals of the Thero-BrachypodieteaSarcopoterium spinosum phryganas', ...), ('Pseudo-steppe with grasses and annuals of the Thero-BrachypodieteaSarcopoterium spinosum phryganas', ...), ('Pseudo-steppe with grasses and annuals of the Thero-BrachypodieteaSarcopoterium spinosum phryganas', ...), ( 'Pseudo-steppe with grasses and annuals of the Thero-BrachypodieteaMediterranean temporary ponds', ...), ( 'Pseudo-steppe with grasses and annuals of the Thero-BrachypodieteaMediterranean temporary ponds', ...), ( 'Pseudo-steppe with grasses and annuals of the Thero-BrachypodieteaMediterranean temporary ponds', ...), ( 'Coastal lagoons', ...), ( 'Coastal lagoons', ...), ( 'Coastal lagoons', ...)], names=['HABITAT', 'STRESSOR']) 2022-04-12 11:45:53,339 (natcap.invest.hra) hra._validate_rating(2814) WARNING "frequency of disturbance" for habitat Posidonia beds (Posidonion oceanicae) and stressor Runway has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,344 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in area rating" for habitat Urban and stressor Runway has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,347 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in area rating" for habitat Beaches dunes sands and stressor Runway has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,348 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in area rating" for habitat Inland marshes and stressor Runway has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,349 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in area rating" for habitat Salt marshes and stressor Runway has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,350 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in area rating" for habitat Water bodies and stressor Runway has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,350 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in area rating" for habitat Posidonia beds (Posidonion oceanicae) and stressor Runway has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,355 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in area rating" for habitat Coastal lagoons and stressor Runway has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,356 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in structure rating" for habitat Urban and stressor Runway has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,358 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in structure rating" for habitat Beaches dunes sands and stressor Runway has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,360 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in structure rating" for habitat Inland marshes and stressor Runway has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,361 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in structure rating" for habitat Salt marshes and stressor Runway has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,362 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in structure rating" for habitat Water bodies and stressor Runway has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,363 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in structure rating" for habitat Posidonia beds (Posidonion oceanicae) and stressor Runway has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,369 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in structure rating" for habitat Coastal lagoons and stressor Runway has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,454 (natcap.invest.hra) hra._validate_rating(2814) WARNING "frequency of disturbance" for habitat Posidonia beds (Posidonion oceanicae) and stressor Buildings has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,466 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in area rating" for habitat Posidonia beds (Posidonion oceanicae) and stressor Buildings has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,476 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in structure rating" for habitat Posidonia beds (Posidonion oceanicae) and stressor Buildings has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,487 (natcap.invest.hra) hra._validate_rating(2814) WARNING "temporal overlap rating" for habitat Posidonia beds (Posidonion oceanicae) and stressor Buildings has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,498 (natcap.invest.hra) hra._validate_rating(2814) WARNING "management effectiveness" for habitat Posidonia beds (Posidonion oceanicae) and stressor Buildings has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,509 (natcap.invest.hra) hra._validate_rating(2814) WARNING "intensity rating" for habitat Posidonia beds (Posidonion oceanicae) and stressor Buildings has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,520 (natcap.invest.hra) hra._validate_rating(2814) WARNING "frequency of disturbance" for habitat Posidonia beds (Posidonion oceanicae) and stressor Road has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,527 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in area rating" for habitat Urban and stressor Road has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,530 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in area rating" for habitat Beaches dunes sands and stressor Road has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,531 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in area rating" for habitat Inland marshes and stressor Road has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,532 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in area rating" for habitat Salt marshes and stressor Road has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,533 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in area rating" for habitat Water bodies and stressor Road has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,534 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in area rating" for habitat Posidonia beds (Posidonion oceanicae) and stressor Road has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,538 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in area rating" for habitat Coastal lagoons and stressor Road has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,539 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in structure rating" for habitat Urban and stressor Road has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,542 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in structure rating" for habitat Beaches dunes sands and stressor Road has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,543 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in structure rating" for habitat Inland marshes and stressor Road has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,544 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in structure rating" for habitat Salt marshes and stressor Road has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,545 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in structure rating" for habitat Water bodies and stressor Road has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,546 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in structure rating" for habitat Posidonia beds (Posidonion oceanicae) and stressor Road has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,551 (natcap.invest.hra) hra._validate_rating(2814) WARNING "change in structure rating" for habitat Coastal lagoons and stressor Road has a rating 0.0 less than 1, so this criteria attribute is ignored in calculation. 2022-04-12 11:45:53,586 (natcap.invest.hra) hra._get_overlap_dataframe(3023) INFO Overlap dataframe was created successfully. 2022-04-12 11:45:53,588 (natcap.invest.hra) hra.execute(331) INFO Target projection from AOI: Transverse_Mercator. EPSG: 32636. Linear unit: 1.0. 2022-04-12 11:45:53,590 (natcap.invest.hra) hra._has_field_name(1441) INFO The name field is not provided in the vector. 2022-04-12 11:45:53,590 (natcap.invest.hra) hra.execute(359) INFO Simplifying AOI vector without subregion field. 2022-04-12 11:45:53,659 (natcap.invest.hra) hra.execute(373) INFO Rasterizing AOI vector. 2022-04-12 11:45:53,703 (natcap.invest.hra) hra.execute(444) INFO Rasterizing Runway vector. 2022-04-12 11:45:53,762 (natcap.invest.hra) hra.execute(444) INFO Rasterizing Buildings vector. 2022-04-12 11:45:53,832 (natcap.invest.hra) hra.execute(444) INFO Rasterizing Road vector. 2022-04-12 11:45:53,900 (natcap.invest.hra) hra.execute(493) INFO Starting align_and_resize_raster_task. 2022-04-12 11:45:55,976 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 1 of 20 aligned: aligned_Urban_test4_500.tif 2022-04-12 11:45:57,876 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 2 of 20 aligned: aligned_Broad-leaved forest_test4_500.tif 2022-04-12 11:45:59,801 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 3 of 20 aligned: aligned_Coniferous forest_test4_500.tif 2022-04-12 11:46:01,782 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 4 of 20 aligned: aligned_Natural grasslands_test4_500.tif 2022-04-12 11:46:03,723 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 5 of 20 aligned: aligned_Beaches dunes sands_test4_500.tif 2022-04-12 11:46:05,644 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 6 of 20 aligned: aligned_Sparsely vegetated areas_test4_500.tif 2022-04-12 11:46:07,533 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 7 of 20 aligned: aligned_Inland marshes_test4_500.tif 2022-04-12 11:46:09,560 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 8 of 20 aligned: aligned_Salt marshes_test4_500.tif 2022-04-12 11:46:11,545 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 9 of 20 aligned: aligned_Water bodies_test4_500.tif 2022-04-12 11:46:13,515 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 10 of 20 aligned: aligned_Posidonia beds (Posidonion oceanicae)_test4_500.tif 2022-04-12 11:46:15,483 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 11 of 20 aligned: aligned_Arborescent matorral with Zyziphus_test4_500.tif 2022-04-12 11:46:17,460 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 12 of 20 aligned: aligned_Thermo-Mediterranean and pre-desert scrub_test4_500.tif 2022-04-12 11:46:19,398 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 13 of 20 aligned: aligned_Mediterranean temporary ponds_test4_500.tif 2022-04-12 11:46:21,360 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 14 of 20 aligned: aligned_Pseudo-steppe with grasses and annuals of the Thero-Brachypodietea_test4_500.tif 2022-04-12 11:46:21,366 (osgeo) utils._log_gdal_errors(98) ERROR [errno 4] Attempt to create new tiff file `C:\\Users\\NYI91156\\OneDrive - Mott MacDonald\\Cyprus\\Model Files\\Habitat Risk Assessment\\Output3\intermediate_outputs\file_preprocessing\aligned_Pseudo-steppe with grasses and annuals of the Thero-BrachypodieteaSarcopoterium spinosum phryganas_test4_500.tif' failed: No error 2022-04-12 11:46:21,366 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 15 of 20 aligned: aligned_Pseudo-steppe with grasses and annuals of the Thero-BrachypodieteaSarcopoterium spinosum phryganas_test4_500.tif 2022-04-12 11:46:23,361 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 16 of 20 aligned: aligned_Pseudo-steppe with grasses and annuals of the Thero-BrachypodieteaMediterranean temporary ponds_test4_500.tif 2022-04-12 11:46:25,278 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 17 of 20 aligned: aligned_Coastal lagoons_test4_500.tif 2022-04-12 11:46:25,291 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 18 of 20 aligned: aligned_Runway_test4_500.tif 2022-04-12 11:46:25,299 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 19 of 20 aligned: aligned_Buildings_test4_500.tif 2022-04-12 11:46:25,306 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 20 of 20 aligned: aligned_Road_test4_500.tif 2022-04-12 11:46:25,307 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(828) INFO aligned all 20 rasters. 2022-04-12 11:46:25,311 (taskgraph.Task) Task.add_task(706) ERROR Something went wrong when adding task align_and_resize_raster_task (9), terminating taskgraph. Traceback (most recent call last): File "taskgraph\Task.py", line 674, in add_task File "taskgraph\Task.py", line 1109, in _call RuntimeError: In Task: align_and_resize_raster_task (9) Missing expected target path results. Expected: ['c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_arborescent matorral with zyziphus_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_beaches dunes sands_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_broad-leaved forest_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_buildings_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_coastal lagoons_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_coniferous forest_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_inland marshes_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_mediterranean temporary ponds_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_natural grasslands_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_posidonia beds (posidonion oceanicae)_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_pseudo-steppe with grasses and annuals of the thero-brachypodietea_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_pseudo-steppe with grasses and annuals of the thero-brachypodieteamediterranean temporary ponds_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_pseudo-steppe with grasses and annuals of the thero-brachypodieteasarcopoterium spinosum phryganas_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_road_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_runway_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_salt marshes_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_sparsely vegetated areas_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_thermo-mediterranean and pre-desert scrub_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_urban_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_water bodies_test4_500.tif'] Observed: {'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_urban_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_thermo-mediterranean and pre-desert scrub_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_posidonia beds (posidonion oceanicae)_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_sparsely vegetated areas_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_coniferous forest_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_arborescent matorral with zyziphus_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_runway_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_buildings_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_beaches dunes sands_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_pseudo-steppe with grasses and annuals of the thero-brachypodietea_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_salt marshes_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_road_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_broad-leaved forest_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_natural grasslands_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_inland marshes_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_pseudo-steppe with grasses and annuals of the thero-brachypodieteamediterranean temporary ponds_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_mediterranean temporary ponds_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_coastal lagoons_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_water bodies_test4_500.tif'} 2022-04-12 11:46:25,315 (natcap.invest.utils) utils.prepare_workspace(167) ERROR Exception while executing Habitat-Risk-Assessment Traceback (most recent call last): File "natcap\invest\utils.py", line 165, in prepare_workspace File "natcap\invest\ui\model.py", line 1649, in _logged_target File "natcap\invest\hra.py", line 494, in execute File "taskgraph\Task.py", line 674, in add_task File "taskgraph\Task.py", line 1109, in _call RuntimeError: In Task: align_and_resize_raster_task (9) Missing expected target path results. Expected: ['c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_arborescent matorral with zyziphus_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_beaches dunes sands_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_broad-leaved forest_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_buildings_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_coastal lagoons_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_coniferous forest_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_inland marshes_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_mediterranean temporary ponds_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_natural grasslands_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_posidonia beds (posidonion oceanicae)_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_pseudo-steppe with grasses and annuals of the thero-brachypodietea_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_pseudo-steppe with grasses and annuals of the thero-brachypodieteamediterranean temporary ponds_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_pseudo-steppe with grasses and annuals of the thero-brachypodieteasarcopoterium spinosum phryganas_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_road_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_runway_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_salt marshes_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_sparsely vegetated areas_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_thermo-mediterranean and pre-desert scrub_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_urban_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_water bodies_test4_500.tif'] Observed: {'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_urban_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_thermo-mediterranean and pre-desert scrub_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_posidonia beds (posidonion oceanicae)_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_sparsely vegetated areas_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_coniferous forest_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_arborescent matorral with zyziphus_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_runway_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_buildings_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_beaches dunes sands_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_pseudo-steppe with grasses and annuals of the thero-brachypodietea_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_salt marshes_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_road_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_broad-leaved forest_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_natural grasslands_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_inland marshes_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_pseudo-steppe with grasses and annuals of the thero-brachypodieteamediterranean temporary ponds_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_mediterranean temporary ponds_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_coastal lagoons_test4_500.tif', 'c:\\users\\nyi91156\\onedrive - mott macdonald\\cyprus\\model files\\habitat risk assessment\\output3\\intermediate_outputs\\file_preprocessing\\aligned_water bodies_test4_500.tif'} 2022-04-12 11:46:25,317 (natcap.invest.utils) utils.prepare_workspace(170) INFO Elapsed time: 32.37s 2022-04-12 11:46:25,319 (natcap.invest.utils) utils.prepare_workspace(173) INFO Execution finished