2021-03-26 09:43:37,079 utils.prepare_workspace(123) INFO Writing log messages to D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality\InVEST-Habitat-Quality-log-2021-03-26--09_43_37.txt
2021-03-26 09:43:37,084 model._logged_target(1646) Level 100 Starting model with parameters: 
Arguments for InVEST natcap.invest.habitat_quality 3.9.0:
half_saturation_constant 0.5
lulc_cur_path            D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality/LULC2019BAPInt.tif
n_workers                -1
results_suffix           
sensitivity_table_path   D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality/sensitivity.csv
threats_table_path       D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality/threats.csv
workspace_dir            D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality

2021-03-26 09:43:37,089 habitat_quality.execute(246) INFO Starting execute of Habitat Quality model.
2021-03-26 09:43:37,090 habitat_quality.execute(252) INFO Creating workspace
2021-03-26 09:43:37,118 habitat_quality.execute(265) INFO Checking Threat and Sensitivity tables for compliance
2021-03-26 09:43:37,152 utils.build_lookup_from_csv(528) WARNING Empty or NaN values were found in the table: D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality/threats.csv.
2021-03-26 09:43:37,195 utils.build_lookup_from_csv(528) WARNING Empty or NaN values were found in the table: D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality/sensitivity.csv.
2021-03-26 09:43:37,200 habitat_quality.execute(292) INFO Validate threat rasters and collect unique LULC codes
2021-03-26 09:43:37,201 habitat_quality.execute(310) DEBUG Validating path for threat: road
2021-03-26 09:43:37,403 habitat_quality._raster_values_in_bounds(974) WARNING Raster has undefined NODATA value for D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality\road_c.tif.
2021-03-26 09:43:37,501 habitat_quality.execute(356) INFO Checking threat raster values are valid ( 0 <= x <= 1 ).
2021-03-26 09:43:37,501 habitat_quality.execute(367) INFO Aligning and resizing land cover and threat rasters
2021-03-26 09:43:37,520 habitat_quality.execute(390) DEBUG Raster paths for aligning: ['D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality\\intermediate\\LULC2019BAPInt_aligned.tif', 'D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality\\intermediate\\road_c_aligned.tif']
2021-03-26 09:43:37,555 geoprocessing.align_and_resize_raster_stack(686) DEBUG assuming manual bounding box mode of [-59.71434070197586, -22.301754906608032, -53.14163726265856, -14.145770779030089]
2021-03-26 09:43:42,772 geoprocessing.logger_callback(3400) INFO Warp 26.0% complete D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality\intermediate\LULC2019BAPInt_aligned.tif
2021-03-26 09:43:48,194 geoprocessing.logger_callback(3400) INFO Warp 44.0% complete D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality\intermediate\LULC2019BAPInt_aligned.tif
2021-03-26 09:43:53,631 geoprocessing.logger_callback(3400) INFO Warp 60.0% complete D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality\intermediate\LULC2019BAPInt_aligned.tif
2021-03-26 09:43:58,715 geoprocessing.logger_callback(3400) INFO Warp 77.0% complete D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality\intermediate\LULC2019BAPInt_aligned.tif
2021-03-26 09:44:03,636 geoprocessing.logger_callback(3400) INFO Warp 100.0% complete D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality\intermediate\LULC2019BAPInt_aligned.tif
2021-03-26 09:44:05,162 geoprocessing.align_and_resize_raster_stack(795) INFO 1 of 2 aligned: LULC2019BAPInt_aligned.tif
2021-03-26 09:44:05,258 geoprocessing.align_and_resize_raster_stack(795) INFO 2 of 2 aligned: road_c_aligned.tif
2021-03-26 09:44:05,259 geoprocessing.align_and_resize_raster_stack(797) INFO aligned all 2 rasters.
2021-03-26 09:44:05,289 habitat_quality.execute(402) DEBUG Updating dict raster paths to reflect aligned paths
2021-03-26 09:44:05,289 habitat_quality.execute(420) INFO Starting habitat_quality biophysical calculations
2021-03-26 09:44:10,308 geoprocessing.<lambda>(927) INFO filling new raster D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality\intermediate\access_layer.tif with 1.0 -- 45.27% complete
2021-03-26 09:44:15,310 geoprocessing.<lambda>(927) INFO filling new raster D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality\intermediate\access_layer.tif with 1.0 -- 83.45% complete
2021-03-26 09:44:19,132 habitat_quality.execute(464) INFO Calculating habitat quality for landuse: D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality\intermediate\LULC2019BAPInt_aligned.tif
2021-03-26 09:44:19,216 geoprocessing.raster_calculator(391) INFO starting stats_worker
2021-03-26 09:44:19,219 threading.run(870) DEBUG stats worker PID: 9188
2021-03-26 09:44:19,220 geoprocessing.raster_calculator(397) INFO started stats_worker <Thread(Thread-6, started daemon 10356)>
2021-03-26 09:44:24,171 geoprocessing.<lambda>(474) INFO 11.3% complete
2021-03-26 09:44:29,174 geoprocessing.<lambda>(474) INFO 21.0% complete
2021-03-26 09:44:34,179 geoprocessing.<lambda>(474) INFO 29.0% complete
2021-03-26 09:44:39,184 geoprocessing.<lambda>(474) INFO 36.3% complete
2021-03-26 09:44:44,191 geoprocessing.<lambda>(474) INFO 44.1% complete
2021-03-26 09:44:49,194 geoprocessing.<lambda>(474) INFO 51.8% complete
2021-03-26 09:44:54,198 geoprocessing.<lambda>(474) INFO 59.7% complete
2021-03-26 09:44:59,198 geoprocessing.<lambda>(474) INFO 67.5% complete
2021-03-26 09:45:04,203 geoprocessing.<lambda>(474) INFO 75.1% complete
2021-03-26 09:45:09,205 geoprocessing.<lambda>(474) INFO 82.9% complete
2021-03-26 09:45:14,205 geoprocessing.<lambda>(474) INFO 90.9% complete
2021-03-26 09:45:19,205 geoprocessing.<lambda>(474) INFO 98.8% complete
2021-03-26 09:45:20,169 geoprocessing.raster_calculator(477) INFO 100.0% complete
2021-03-26 09:45:20,170 geoprocessing.raster_calculator(480) INFO Waiting for raster stats worker result.
2021-03-26 09:45:21,639 habitat_quality.execute(499) DEBUG Calculating threat: road.
Threat data: {'max_dist': 5, 'weight': 0.75, 'threat': 'road', 'decay': 'exponential', 'descrip': '', 'base_path': '', 'cur_path': 'road_c.tif', 'fut_path': ''}
2021-03-26 09:45:21,651 habitat_quality._create_decay_kernel(859) DEBUG Max distance in pixels: 18553248.465545632
2021-03-26 09:45:21,673 utils._log_gdal_errors(80) ERROR [errno 6] D:/NOVA/U7.MODSIG/Final project/Data/Habitat Quality\intermediate\kernels\kernel_road_c.tif: File too large regarding tile size. This would result in a file with tile arrays larger than 2GB
2021-03-26 09:45:21,674 Task.add_task(781) ERROR Something went wrong when adding task decay_kernel_exponential_c_road (4), terminating taskgraph.
Traceback (most recent call last):
  File "site-packages\taskgraph\Task.py", line 747, in add_task
  File "site-packages\taskgraph\Task.py", line 1234, in _call
  File "site-packages\natcap\invest\habitat_quality.py", line 873, in _create_decay_kernel
  File "site-packages\natcap\invest\utils.py", line 314, in exponential_decay_kernel_raster
AttributeError: 'NoneType' object has no attribute 'SetGeoTransform'
2021-03-26 09:45:21,677 model._logged_target(1652) ERROR Exception while executing <function execute at 0x000001C7692DA288>
Traceback (most recent call last):
  File "site-packages\natcap\invest\ui\model.py", line 1649, in _logged_target
  File "site-packages\natcap\invest\habitat_quality.py", line 529, in execute
  File "site-packages\taskgraph\Task.py", line 747, in add_task
  File "site-packages\taskgraph\Task.py", line 1234, in _call
  File "site-packages\natcap\invest\habitat_quality.py", line 873, in _create_decay_kernel
  File "site-packages\natcap\invest\utils.py", line 314, in exponential_decay_kernel_raster
AttributeError: 'NoneType' object has no attribute 'SetGeoTransform'
2021-03-26 09:45:21,678 model._logged_target(1655) INFO Execution finished
2021-03-26 09:45:21,681 utils.prepare_workspace(129) INFO Elapsed time: 1m 44.599999999999994s