2022-11-28 11:14:52,811 (natcap.invest.utils) utils.prepare_workspace(161) Level 100 Writing log messages to [C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/outputs2\InVEST-Habitat-Risk-Assessment-log-2022-11-28--11_14_52.txt] 2022-11-28 11:14:52,815 (natcap.invest.ui.model) model._logged_target(1626) Level 100 Starting model with parameters: Arguments for InVEST natcap.invest.hra 3.11.0.post433+gba398f02c: aoi_vector_path C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/AOI/northPel_AOI.shp criteria_table_path C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/criteria_scores_IndPurseN_SASLnr.csv decay_eq none info_table_path C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/stressor_info_SASLnr.csv max_rating 3 n_overlapping_stressors 2 n_workers -1 resolution 3000 results_suffix _nrtest2 risk_eq euclidean visualize_outputs False workspace_dir C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/outputs2 2022-11-28 11:14:52,851 (natcap.invest.hra) hra.execute(293) INFO The maximum pairwise risk score for euclidean risk is 2.8284271247461903 2022-11-28 11:14:52,921 (pygeoprocessing.geoprocessing) geoprocessing.reproject_vector(1792) INFO starting reprojection 2022-11-28 11:14:52,929 (pygeoprocessing.geoprocessing) geoprocessing.reproject_vector(1834) INFO reprojection 100.0% complete on reprojected_Otaria_flavescens_nrtest2.shp 2022-11-28 11:14:52,942 (natcap.invest.hra) hra._simplify(1450) INFO Simplifying vector with tolerance 1500.0: C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/SASLdist/SASLnr_IndPurseN.shp 2022-11-28 11:14:53,026 (pygeoprocessing.geoprocessing) geoprocessing.reproject_vector(1792) INFO starting reprojection 2022-11-28 11:14:53,042 (pygeoprocessing.geoprocessing) geoprocessing.reproject_vector(1834) INFO reprojection 100.0% complete on reprojected_anchoveta_nrtest2.shp 2022-11-28 11:14:53,057 (natcap.invest.hra) hra._simplify(1450) INFO Simplifying vector with tolerance 1500.0: C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/Anchovy/IndPurseN_Anch5_SASLnr_RC.shp 2022-11-28 11:14:53,127 (pygeoprocessing.geoprocessing) geoprocessing.reproject_vector(1792) INFO starting reprojection 2022-11-28 11:14:53,149 (pygeoprocessing.geoprocessing) geoprocessing.reproject_vector(1834) INFO reprojection 100.0% complete on reprojected_jurel_nrtest2.shp 2022-11-28 11:14:53,163 (natcap.invest.hra) hra._simplify(1450) INFO Simplifying vector with tolerance 1500.0: C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/Jurel/IndPurseN_Jurel10_SASLnr_RC.shp 2022-11-28 11:14:53,232 (pygeoprocessing.geoprocessing) geoprocessing.reproject_vector(1792) INFO starting reprojection 2022-11-28 11:14:53,248 (pygeoprocessing.geoprocessing) geoprocessing.reproject_vector(1834) INFO reprojection 100.0% complete on reprojected_Otaria_flavescens-anchoveta-intensity_nrtest2.shp 2022-11-28 11:14:53,263 (natcap.invest.hra) hra._simplify(1450) INFO Simplifying vector with tolerance 1500.0: C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/Anchovy/IndPurseN_Anch5_SASLnr_RC.shp 2022-11-28 11:14:53,329 (pygeoprocessing.geoprocessing) geoprocessing.reproject_vector(1792) INFO starting reprojection 2022-11-28 11:14:53,341 (pygeoprocessing.geoprocessing) geoprocessing.reproject_vector(1834) INFO reprojection 100.0% complete on reprojected_Otaria_flavescens-anchoveta-likelihood of interaction_nrtest2.shp 2022-11-28 11:14:53,355 (natcap.invest.hra) hra._simplify(1450) INFO Simplifying vector with tolerance 1500.0: C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/LOI/Anchovy/IndPurseN_Anch5_SASLnr_LOIRC.shp 2022-11-28 11:14:53,414 (pygeoprocessing.geoprocessing) geoprocessing.reproject_vector(1792) INFO starting reprojection 2022-11-28 11:14:53,436 (pygeoprocessing.geoprocessing) geoprocessing.reproject_vector(1834) INFO reprojection 100.0% complete on reprojected_Otaria_flavescens-jurel-intensity_nrtest2.shp 2022-11-28 11:14:53,451 (natcap.invest.hra) hra._simplify(1450) INFO Simplifying vector with tolerance 1500.0: C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/Jurel/IndPurseN_Jurel10_SASLnr_RC.shp 2022-11-28 11:14:53,538 (pygeoprocessing.geoprocessing) geoprocessing.reproject_vector(1792) INFO starting reprojection 2022-11-28 11:14:53,553 (pygeoprocessing.geoprocessing) geoprocessing.reproject_vector(1834) INFO reprojection 100.0% complete on reprojected_Otaria_flavescens-jurel-likelihood of interaction_nrtest2.shp 2022-11-28 11:14:53,567 (natcap.invest.hra) hra._simplify(1450) INFO Simplifying vector with tolerance 1500.0: C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/LOI/Jurel/IndPurseN_Jurel10_SASLnr_LOIRC.shp 2022-11-28 11:14:53,665 (natcap.invest.hra) hra._align(1322) INFO Aligning 7 vectors 2022-11-28 11:14:53,829 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2022-11-28 11:14:53,830 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 108212 2022-11-28 11:14:53,830 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2022-11-28 11:14:53,836 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(482) INFO 100.0% complete 2022-11-28 11:14:53,837 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(485) INFO Waiting for raster stats worker result. 2022-11-28 11:14:53,852 (natcap.invest.hra) hra._calculate_decayed_distance(1851) INFO Buffer distance for C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/outputs2\intermediate_outputs\decayed_edt_anchoveta_nrtest2.tif is 0, skipping distance transform 2022-11-28 11:14:53,861 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2022-11-28 11:14:53,862 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 108212 2022-11-28 11:14:53,862 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2022-11-28 11:14:53,863 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(482) INFO 100.0% complete 2022-11-28 11:14:53,863 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(485) INFO Waiting for raster stats worker result. 2022-11-28 11:14:53,876 (natcap.invest.hra) hra._calculate_decayed_distance(1851) INFO Buffer distance for C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/outputs2\intermediate_outputs\decayed_edt_jurel_nrtest2.tif is 0, skipping distance transform 2022-11-28 11:14:53,885 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2022-11-28 11:14:53,887 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 108212 2022-11-28 11:14:53,887 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2022-11-28 11:14:53,888 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(482) INFO 100.0% complete 2022-11-28 11:14:53,888 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(485) INFO Waiting for raster stats worker result. 2022-11-28 11:14:53,981 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2022-11-28 11:14:53,983 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 108212 2022-11-28 11:14:53,983 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2022-11-28 11:14:53,984 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(482) INFO 100.0% complete 2022-11-28 11:14:53,984 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(485) INFO Waiting for raster stats worker result. 2022-11-28 11:14:54,014 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2022-11-28 11:14:54,016 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 108212 2022-11-28 11:14:54,016 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2022-11-28 11:14:54,017 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(482) INFO 100.0% complete 2022-11-28 11:14:54,017 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(485) INFO Waiting for raster stats worker result. 2022-11-28 11:14:54,120 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2022-11-28 11:14:54,122 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 108212 2022-11-28 11:14:54,122 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2022-11-28 11:14:54,123 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(482) INFO 100.0% complete 2022-11-28 11:14:54,124 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(485) INFO Waiting for raster stats worker result. 2022-11-28 11:14:54,153 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2022-11-28 11:14:54,155 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 108212 2022-11-28 11:14:54,155 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2022-11-28 11:14:54,156 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(482) INFO 100.0% complete 2022-11-28 11:14:54,157 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(485) INFO Waiting for raster stats worker result. 2022-11-28 11:14:54,189 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2022-11-28 11:14:54,191 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 108212 2022-11-28 11:14:54,191 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2022-11-28 11:14:54,192 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(482) INFO 100.0% complete 2022-11-28 11:14:54,193 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(485) INFO Waiting for raster stats worker result. 2022-11-28 11:14:54,216 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2022-11-28 11:14:54,218 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 108212 2022-11-28 11:14:54,218 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2022-11-28 11:14:54,220 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(482) INFO 100.0% complete 2022-11-28 11:14:54,220 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(485) INFO Waiting for raster stats worker result. 2022-11-28 11:14:54,253 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2022-11-28 11:14:54,255 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 108212 2022-11-28 11:14:54,255 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2022-11-28 11:14:54,256 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(482) INFO 100.0% complete 2022-11-28 11:14:54,256 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(485) INFO Waiting for raster stats worker result. 2022-11-28 11:14:54,278 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2022-11-28 11:14:54,280 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 108212 2022-11-28 11:14:54,280 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2022-11-28 11:14:54,281 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(482) INFO 100.0% complete 2022-11-28 11:14:54,281 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(485) INFO Waiting for raster stats worker result. 2022-11-28 11:14:54,305 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(396) INFO starting stats_worker 2022-11-28 11:14:54,307 (pygeoprocessing.geoprocessing_core) threading.run(953) DEBUG stats worker PID: 108212 2022-11-28 11:14:54,307 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(402) INFO started stats_worker 2022-11-28 11:14:54,308 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(482) INFO 100.0% complete 2022-11-28 11:14:54,308 (pygeoprocessing.geoprocessing) geoprocessing.raster_calculator(485) INFO Waiting for raster stats worker result. 2022-11-28 11:14:54,343 (natcap.invest.hra) hra._simplify(1450) INFO Simplifying vector with tolerance 1500.0: C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/AOI/northPel_AOI.shp 2022-11-28 11:14:54,416 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 1 of 1 aligned: clipped_raster.tif 2022-11-28 11:14:54,416 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(828) INFO aligned all 1 rasters. 2022-11-28 11:14:54,418 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1309) INFO build a lookup of aggregate field value to FID 2022-11-28 11:14:54,419 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1316) INFO creating disjoint polygon set 2022-11-28 11:14:54,424 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2308) INFO build shapely polygon list 2022-11-28 11:14:54,425 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2333) INFO build shapely rtree index 2022-11-28 11:14:54,427 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2346) INFO poly feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,427 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2350) INFO build poly intersection lookup 2022-11-28 11:14:54,427 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2372) INFO poly intersection feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,427 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2406) INFO maximal subset build 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,433 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1336) INFO processing 1 disjoint polygon sets 2022-11-28 11:14:54,434 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1370) INFO disjoint polygon set 1 of 1 100.0% processed on simplified_aoi.gpkg 2022-11-28 11:14:54,435 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1378) INFO rasterizing disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,439 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1396) INFO summarizing rasterized disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,440 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1446) DEBUG unset_fids: 0 of 1 2022-11-28 11:14:54,441 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1451) DEBUG gt [ 1.2720533e+05 3.0000000e+03 0.0000000e+00 7.9706350e+06 0.0000000e+00 -3.0000000e+03] for ('C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/outputs2\\intermediate_outputs\\E_Otaria_flavescens_anchoveta_nrtest2.tif', 1) 2022-11-28 11:14:54,441 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1537) DEBUG remaining unset_fids: 0 of 1 2022-11-28 11:14:54,441 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1545) INFO all done processing polygon sets for simplified_aoi.gpkg 2022-11-28 11:14:54,467 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 1 of 1 aligned: clipped_raster.tif 2022-11-28 11:14:54,467 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(828) INFO aligned all 1 rasters. 2022-11-28 11:14:54,469 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1309) INFO build a lookup of aggregate field value to FID 2022-11-28 11:14:54,470 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1316) INFO creating disjoint polygon set 2022-11-28 11:14:54,474 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2308) INFO build shapely polygon list 2022-11-28 11:14:54,475 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2333) INFO build shapely rtree index 2022-11-28 11:14:54,476 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2346) INFO poly feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,476 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2350) INFO build poly intersection lookup 2022-11-28 11:14:54,476 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2372) INFO poly intersection feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,476 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2406) INFO maximal subset build 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,483 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1336) INFO processing 1 disjoint polygon sets 2022-11-28 11:14:54,484 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1370) INFO disjoint polygon set 1 of 1 100.0% processed on simplified_aoi.gpkg 2022-11-28 11:14:54,484 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1378) INFO rasterizing disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,488 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1396) INFO summarizing rasterized disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,489 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1446) DEBUG unset_fids: 0 of 1 2022-11-28 11:14:54,489 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1451) DEBUG gt [ 1.2720533e+05 3.0000000e+03 0.0000000e+00 7.9706350e+06 0.0000000e+00 -3.0000000e+03] for ('C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/outputs2\\intermediate_outputs\\C_Otaria_flavescens_anchoveta_nrtest2.tif', 1) 2022-11-28 11:14:54,489 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1537) DEBUG remaining unset_fids: 0 of 1 2022-11-28 11:14:54,490 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1545) INFO all done processing polygon sets for simplified_aoi.gpkg 2022-11-28 11:14:54,514 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 1 of 1 aligned: clipped_raster.tif 2022-11-28 11:14:54,514 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(828) INFO aligned all 1 rasters. 2022-11-28 11:14:54,516 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1309) INFO build a lookup of aggregate field value to FID 2022-11-28 11:14:54,517 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1316) INFO creating disjoint polygon set 2022-11-28 11:14:54,521 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2308) INFO build shapely polygon list 2022-11-28 11:14:54,522 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2333) INFO build shapely rtree index 2022-11-28 11:14:54,523 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2346) INFO poly feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,523 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2350) INFO build poly intersection lookup 2022-11-28 11:14:54,524 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2372) INFO poly intersection feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,524 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2406) INFO maximal subset build 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,529 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1336) INFO processing 1 disjoint polygon sets 2022-11-28 11:14:54,530 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1370) INFO disjoint polygon set 1 of 1 100.0% processed on simplified_aoi.gpkg 2022-11-28 11:14:54,530 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1378) INFO rasterizing disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,533 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1396) INFO summarizing rasterized disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,534 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1446) DEBUG unset_fids: 0 of 1 2022-11-28 11:14:54,534 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1451) DEBUG gt [ 1.2720533e+05 3.0000000e+03 0.0000000e+00 7.9706350e+06 0.0000000e+00 -3.0000000e+03] for ('C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/outputs2\\intermediate_outputs\\RISK_Otaria_flavescens_anchoveta_nrtest2.tif', 1) 2022-11-28 11:14:54,535 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1537) DEBUG remaining unset_fids: 0 of 1 2022-11-28 11:14:54,535 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1545) INFO all done processing polygon sets for simplified_aoi.gpkg 2022-11-28 11:14:54,569 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 1 of 1 aligned: clipped_raster.tif 2022-11-28 11:14:54,569 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(828) INFO aligned all 1 rasters. 2022-11-28 11:14:54,571 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1309) INFO build a lookup of aggregate field value to FID 2022-11-28 11:14:54,572 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1316) INFO creating disjoint polygon set 2022-11-28 11:14:54,578 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2308) INFO build shapely polygon list 2022-11-28 11:14:54,579 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2333) INFO build shapely rtree index 2022-11-28 11:14:54,579 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2346) INFO poly feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,580 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2350) INFO build poly intersection lookup 2022-11-28 11:14:54,580 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2372) INFO poly intersection feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,580 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2406) INFO maximal subset build 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,587 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1336) INFO processing 1 disjoint polygon sets 2022-11-28 11:14:54,589 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1370) INFO disjoint polygon set 1 of 1 100.0% processed on simplified_aoi.gpkg 2022-11-28 11:14:54,590 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1378) INFO rasterizing disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,594 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1396) INFO summarizing rasterized disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,595 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1446) DEBUG unset_fids: 0 of 1 2022-11-28 11:14:54,596 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1451) DEBUG gt [ 1.2720533e+05 3.0000000e+03 0.0000000e+00 7.9706350e+06 0.0000000e+00 -3.0000000e+03] for ('C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/outputs2\\intermediate_outputs\\reclass_Otaria_flavescens_anchoveta_nrtest2.tif', 1) 2022-11-28 11:14:54,596 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1537) DEBUG remaining unset_fids: 0 of 1 2022-11-28 11:14:54,596 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1545) INFO all done processing polygon sets for simplified_aoi.gpkg 2022-11-28 11:14:54,626 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 1 of 1 aligned: clipped_raster.tif 2022-11-28 11:14:54,626 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(828) INFO aligned all 1 rasters. 2022-11-28 11:14:54,629 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1309) INFO build a lookup of aggregate field value to FID 2022-11-28 11:14:54,629 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1316) INFO creating disjoint polygon set 2022-11-28 11:14:54,637 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2308) INFO build shapely polygon list 2022-11-28 11:14:54,638 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2333) INFO build shapely rtree index 2022-11-28 11:14:54,639 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2346) INFO poly feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,639 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2350) INFO build poly intersection lookup 2022-11-28 11:14:54,639 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2372) INFO poly intersection feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,640 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2406) INFO maximal subset build 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,646 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1336) INFO processing 1 disjoint polygon sets 2022-11-28 11:14:54,647 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1370) INFO disjoint polygon set 1 of 1 100.0% processed on simplified_aoi.gpkg 2022-11-28 11:14:54,647 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1378) INFO rasterizing disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,651 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1396) INFO summarizing rasterized disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,653 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1446) DEBUG unset_fids: 0 of 1 2022-11-28 11:14:54,653 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1451) DEBUG gt [ 1.2720533e+05 3.0000000e+03 0.0000000e+00 7.9706350e+06 0.0000000e+00 -3.0000000e+03] for ('C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/outputs2\\intermediate_outputs\\E_Otaria_flavescens_jurel_nrtest2.tif', 1) 2022-11-28 11:14:54,653 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1537) DEBUG remaining unset_fids: 0 of 1 2022-11-28 11:14:54,653 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1545) INFO all done processing polygon sets for simplified_aoi.gpkg 2022-11-28 11:14:54,684 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 1 of 1 aligned: clipped_raster.tif 2022-11-28 11:14:54,684 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(828) INFO aligned all 1 rasters. 2022-11-28 11:14:54,687 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1309) INFO build a lookup of aggregate field value to FID 2022-11-28 11:14:54,687 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1316) INFO creating disjoint polygon set 2022-11-28 11:14:54,693 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2308) INFO build shapely polygon list 2022-11-28 11:14:54,694 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2333) INFO build shapely rtree index 2022-11-28 11:14:54,695 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2346) INFO poly feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,695 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2350) INFO build poly intersection lookup 2022-11-28 11:14:54,695 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2372) INFO poly intersection feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,695 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2406) INFO maximal subset build 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,701 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1336) INFO processing 1 disjoint polygon sets 2022-11-28 11:14:54,702 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1370) INFO disjoint polygon set 1 of 1 100.0% processed on simplified_aoi.gpkg 2022-11-28 11:14:54,702 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1378) INFO rasterizing disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,706 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1396) INFO summarizing rasterized disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,707 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1446) DEBUG unset_fids: 0 of 1 2022-11-28 11:14:54,707 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1451) DEBUG gt [ 1.2720533e+05 3.0000000e+03 0.0000000e+00 7.9706350e+06 0.0000000e+00 -3.0000000e+03] for ('C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/outputs2\\intermediate_outputs\\C_Otaria_flavescens_jurel_nrtest2.tif', 1) 2022-11-28 11:14:54,708 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1537) DEBUG remaining unset_fids: 0 of 1 2022-11-28 11:14:54,708 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1545) INFO all done processing polygon sets for simplified_aoi.gpkg 2022-11-28 11:14:54,741 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 1 of 1 aligned: clipped_raster.tif 2022-11-28 11:14:54,741 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(828) INFO aligned all 1 rasters. 2022-11-28 11:14:54,743 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1309) INFO build a lookup of aggregate field value to FID 2022-11-28 11:14:54,744 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1316) INFO creating disjoint polygon set 2022-11-28 11:14:54,748 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2308) INFO build shapely polygon list 2022-11-28 11:14:54,749 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2333) INFO build shapely rtree index 2022-11-28 11:14:54,750 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2346) INFO poly feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,750 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2350) INFO build poly intersection lookup 2022-11-28 11:14:54,751 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2372) INFO poly intersection feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,751 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2406) INFO maximal subset build 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,757 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1336) INFO processing 1 disjoint polygon sets 2022-11-28 11:14:54,757 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1370) INFO disjoint polygon set 1 of 1 100.0% processed on simplified_aoi.gpkg 2022-11-28 11:14:54,757 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1378) INFO rasterizing disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,760 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1396) INFO summarizing rasterized disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,763 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1446) DEBUG unset_fids: 0 of 1 2022-11-28 11:14:54,763 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1451) DEBUG gt [ 1.2720533e+05 3.0000000e+03 0.0000000e+00 7.9706350e+06 0.0000000e+00 -3.0000000e+03] for ('C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/outputs2\\intermediate_outputs\\RISK_Otaria_flavescens_jurel_nrtest2.tif', 1) 2022-11-28 11:14:54,764 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1537) DEBUG remaining unset_fids: 0 of 1 2022-11-28 11:14:54,764 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1545) INFO all done processing polygon sets for simplified_aoi.gpkg 2022-11-28 11:14:54,791 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 1 of 1 aligned: clipped_raster.tif 2022-11-28 11:14:54,792 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(828) INFO aligned all 1 rasters. 2022-11-28 11:14:54,794 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1309) INFO build a lookup of aggregate field value to FID 2022-11-28 11:14:54,794 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1316) INFO creating disjoint polygon set 2022-11-28 11:14:54,798 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2308) INFO build shapely polygon list 2022-11-28 11:14:54,799 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2333) INFO build shapely rtree index 2022-11-28 11:14:54,800 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2346) INFO poly feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,800 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2350) INFO build poly intersection lookup 2022-11-28 11:14:54,800 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2372) INFO poly intersection feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,801 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2406) INFO maximal subset build 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,807 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1336) INFO processing 1 disjoint polygon sets 2022-11-28 11:14:54,809 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1370) INFO disjoint polygon set 1 of 1 100.0% processed on simplified_aoi.gpkg 2022-11-28 11:14:54,809 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1378) INFO rasterizing disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,812 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1396) INFO summarizing rasterized disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,813 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1446) DEBUG unset_fids: 0 of 1 2022-11-28 11:14:54,813 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1451) DEBUG gt [ 1.2720533e+05 3.0000000e+03 0.0000000e+00 7.9706350e+06 0.0000000e+00 -3.0000000e+03] for ('C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/outputs2\\intermediate_outputs\\reclass_Otaria_flavescens_jurel_nrtest2.tif', 1) 2022-11-28 11:14:54,814 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1537) DEBUG remaining unset_fids: 0 of 1 2022-11-28 11:14:54,814 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1545) INFO all done processing polygon sets for simplified_aoi.gpkg 2022-11-28 11:14:54,843 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(824) INFO 1 of 1 aligned: clipped_raster.tif 2022-11-28 11:14:54,843 (pygeoprocessing.geoprocessing) geoprocessing.align_and_resize_raster_stack(828) INFO aligned all 1 rasters. 2022-11-28 11:14:54,845 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1309) INFO build a lookup of aggregate field value to FID 2022-11-28 11:14:54,846 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1316) INFO creating disjoint polygon set 2022-11-28 11:14:54,850 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2308) INFO build shapely polygon list 2022-11-28 11:14:54,851 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2333) INFO build shapely rtree index 2022-11-28 11:14:54,852 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2346) INFO poly feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,852 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2350) INFO build poly intersection lookup 2022-11-28 11:14:54,852 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2372) INFO poly intersection feature lookup 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,853 (pygeoprocessing.geoprocessing) geoprocessing.calculate_disjoint_polygon_set(2406) INFO maximal subset build 100.0% complete on simplified_aoi.gpkg 2022-11-28 11:14:54,858 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1336) INFO processing 1 disjoint polygon sets 2022-11-28 11:14:54,859 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1370) INFO disjoint polygon set 1 of 1 100.0% processed on simplified_aoi.gpkg 2022-11-28 11:14:54,859 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1378) INFO rasterizing disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,862 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1396) INFO summarizing rasterized disjoint polygon set 1 of 1 simplified_aoi.gpkg 2022-11-28 11:14:54,864 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1446) DEBUG unset_fids: 0 of 1 2022-11-28 11:14:54,864 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1451) DEBUG gt [ 1.2720533e+05 3.0000000e+03 0.0000000e+00 7.9706350e+06 0.0000000e+00 -3.0000000e+03] for ('C:/Users/kelly/Desktop/ByRAs/SASL_IndPurseN/InputFishingDist/outputs2\\intermediate_outputs\\reclass_total_risk_Otaria_flavescens_nrtest2.tif', 1) 2022-11-28 11:14:54,865 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1537) DEBUG remaining unset_fids: 0 of 1 2022-11-28 11:14:54,865 (pygeoprocessing.geoprocessing) geoprocessing.zonal_statistics(1545) INFO all done processing polygon sets for simplified_aoi.gpkg 2022-11-28 11:14:54,882 (natcap.invest.hra) hra.execute(833) INFO HRA complete! 2022-11-28 11:14:54,884 (natcap.invest.utils) utils.prepare_workspace(169) INFO Elapsed time: 2.07s 2022-11-28 11:14:54,884 (natcap.invest.utils) utils.prepare_workspace(172) INFO Execution finished